CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28194	Sorghum	endoplasmic reticulum	93.33	98.84
OQU83246	Sorghum	endoplasmic reticulum	80.6	97.71
Zm00001d052997_P001	Maize	cytosol	61.49	60.12
Os11t0224900-00	Rice	plasma membrane	59.7	58.77
EES08313	Sorghum	cytosol	48.46	54.9
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	48.36	53.41
EES09588	Sorghum	cytosol	46.27	51.32
EES09609	Sorghum	cytosol	44.98	49.83
OQU84545	Sorghum	cytosol, endoplasmic reticulum	36.12	39.67
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.77	33.29
KXG22876	Sorghum	cytosol	17.81	32.49
EER95978	Sorghum	cytosol	28.06	31.58
EES08155	Sorghum	cytosol	27.96	30.81
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.16	30.56
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.46	29.58
KXG26778	Sorghum	cytosol, plastid	27.26	29.24
KXG20757	Sorghum	cytosol	27.46	29.11
KXG20759	Sorghum	extracellular	27.46	28.99
EER94459	Sorghum	extracellular, vacuole	26.47	28.98
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	27.66	28.96
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.77	28.83
KXG20755	Sorghum	cytosol	26.97	28.62
KXG20754	Sorghum	extracellular	26.87	28.48
KXG20758	Sorghum	cytosol	26.67	28.42
Solyc08g005440.2.1	Tomato	cytosol, extracellular	26.27	28.36
KXG33491	Sorghum	cytosol	23.18	27.97
PGSC0003DMT400047578	Potato	plasma membrane	26.27	27.97
AT3G07040.1	Thale cress	cytosol	24.98	27.11

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5RHK0	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlants:OQU83240	ProteinID:OQU83240	ProteinID:OQU83240.1	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF9	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3005G095000	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000B42387D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:14922759..14927214

Molecular Weight (calculated)

113648.0 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.077

Length

1005 amino acids

Sequence
(BLAST)

0001: MAEAALVALS KIGFYLAGEA ATFVATKFSN LTELPNTVQR VRRQLLMMNL FIRKTGALYL SDELLKGWIS EVRMLAYRVE DVMDNFSYHY LRYKNDQFLK
0101: RLSKGINYTA IFSGISDELI QIEKEIVHVS MLKDQWLRPV HEFLPTQIHN SELQFPQYSM PQFMKDEDLV GIEKNREQLT KWLRSDTHDL KVVSVCGMGG
0201: IGKTTLTANV YEKQRDNFKV LLWLTISQTY NSVEALLRKL LGMTRADSGS MEMGKRKSGG TDSMDIRKVK TELREVFGTK KYLVVLDDIW NPQVYESMRD
0301: VFEDSKNGSC IVITTRKEDV AALASKHYQL KLSPLGLKDA LCLLCTKAFP YNDESDGPSK VLELATDTAN KCNGSSLVNC PAELHELATG VAKKFEALLL
0401: EQCPAELQEL ATDAIRKCEG LSMAKSSSEL LELANDIAKK SVALPVVKCP LEMQVLAVNI AKKCGGLPLA IVSIGSLLST RKLILPVWKQ IYDQLPSELE
0501: KYAQVRGILS LSYYDLPGEL RNCFLYCSMF PEDYLLPREK LVRLWIAEGF VVKKGNSTLE EVAEGYLMEL IHRNMLQIVD NDELGGVSTF RMHDILRELA
0601: LRVSNVEMFG IVNDFGAVIQ MDKDVRRLSA FRWRKMKNDA SKMKFPRLRT LMASETIVMS IPSILSESKY LTVLELQDSE VTTLPASIGH LFNLRYIGLR
0701: NTGISVLPES IENLINLQTL DVKSTNIRNL PHGIVKLTKL RHILADRYAD VKQSEFRYFV GVEAPIGLSN LEELQTLETV QSSIYLAEQL ENMMQLRSVW
0801: IENISTAHCS KICKVLSMMP LLDSLLLSAS NVNEPLSFED LKPTSTKLHR LIVRGCWAGR TLKCPMFEHH GRNLKYLALS GCHLGGEDPL VFLASHAPHL
0901: SYLRLNNINS KHELVVPADS FTHLKTLVLM GLHDVSFLDI GHGSLPVIEG IYITSLPKLA KVPQGIENCP CLKKLWLLGL HEDFKAQWNN KRMKQKMQHV
1001: PEIRI

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.