CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014654_P001	Maize	cytosol, endoplasmic reticulum	90.24	90.24
KXG20759	Sorghum	extracellular	73.59	72.9
KXG20755	Sorghum	cytosol	72.64	72.33
KXG20754	Sorghum	extracellular	72.53	72.15
KXG20757	Sorghum	cytosol	72.11	71.73
Os06t0698812-00	Rice	cytosol, extracellular	20.36	65.31
TraesCS7D01G416200.1	Wheat	extracellular	59.7	63.62
TraesCS7B01G323800.1	Wheat	extracellular	62.67	62.87
TraesCS7A01G423400.1	Wheat	extracellular	62.67	62.87
TraesCS7B01G324300.1	Wheat	extracellular	62.46	62.66
HORVU7Hr1G097880.1	Barley	cytosol, extracellular	62.25	62.45
EER95978	Sorghum	cytosol	41.57	43.9
KXG22876	Sorghum	cytosol	25.45	43.56
KXG26778	Sorghum	cytosol, plastid	33.09	33.3
OQU84545	Sorghum	cytosol, endoplasmic reticulum	31.71	32.68
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	26.94	32.65
EES09588	Sorghum	cytosol	30.54	31.79
EER94459	Sorghum	extracellular, vacuole	30.86	31.7
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.12	31.21
EES08313	Sorghum	cytosol	29.27	31.12
EES09609	Sorghum	cytosol	29.9	31.09
EES08155	Sorghum	cytosol	30.01	31.03
AT3G07040.1	Thale cress	cytosol	30.22	30.78
KXG33491	Sorghum	cytosol	26.94	30.49
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.9	30.23
PGSC0003DMT400047578	Potato	plasma membrane	30.01	29.98
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.48	29.8
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.95	29.32
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	29.69	29.17
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.53	29.05
OQU83246	Sorghum	endoplasmic reticulum	23.65	26.9
OQU83240	Sorghum	cytosol, extracellular	28.42	26.67
KXG28194	Sorghum	endoplasmic reticulum	26.83	26.66

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A194YLC8
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0043531	InterPro:IPR001611
InterPro:IPR032675	InterPro:IPR036388	EnsemblPlants:KXG20758	ProteinID:KXG20758	ProteinID:KXG20758.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:NB-ARC	ProteinID:OQU76987.1	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3010G248900	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0007F1C8AB	InterPro:WH-like_DNA-bd_sf	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:58861988..58867857

Molecular Weight (calculated)

108391.0 Da

IEP (calculated)

7.947

GRAVY (calculated)

-0.106

Length

943 amino acids

Sequence
(BLAST)

001: MADALFVVLR KVALSLGEGA LVKIGTDVVE AAPILTDFEH GMRQIEGELL ILQAFIGQVR MQKAGDKAFH AWLDQVRDVS HEVEDIVDEY AYLTAQDVDT
101: SSFFKRKFHQ VKNFAAWQKL PVRISQVEAR IQRLSEMRNR YGISVGEQDR SSKLQQSNQL SVSDSAYLTD DSEIVGHAEE IGRLTQWLLE EKQDRTLIAI
201: FGMGGLGKTT VASSVYKNQK IRRDFDCHAW VTVSQTYQVE ELLREIMNQL TEQRSSLASG FMTMNRMKLV EIIQSYLRDK KYFIVLDDVW EKDAWSFLNY
301: AFVKNNCGSK VLITTRRKDV SSLAVHNRVI ELKTLNYAES WELFCKKAFF ALEGNICPKN LTSLAKKIAD KCQGLPLAII AIGSILSYHA LDEWEWAFFY
401: NQLNWQLANN SELSWISTVL NLSLDDLPSH LRSCFLYCSL FPEDHWIKRK QIAKLWIAEG FVEERGDGTT MEEVAEHYLA ELTHRSLLQV IERNANGRPR
501: TFVMHDLVRE VTSITAEKEK FAVIHGHVGA TQLSHNARRL CIQNSAHSQN YLGNSHLRSF ILFDSLVPSS WIYDVSSHFR LLRVLSLRFT NIEQVPCMVT
601: ELYNLRYLDI SYTKVKQIPA SFRKLVHLQV LDLRFSYVEE LPLEITMLTN LRHLHAVVVR DFQERSLNCF SATKIPGNIC GLKNLQSLHT VSANNDLVSQ
701: LGKLTLMRSL TIMSVRQSYI AELWNSLTKM PNLSVLIIFA SDMDEILDLR MLRPLPNLKF FWLAGKMMGG MLPLIFNKFE KLTRLKLDWS GLNKDPISSF
801: SYMLTLVDLW LFGAYYGEHL SFCAGWFPNL KTLHIADMEH LTQIKIEDGT MMGLHHLELV GLRNMRVVPK GIKYIRTLRQ MFLTDMPKEL VESLRGSDSH
901: IVQHVPNIHI FDSTDSEAVN NFIFWPYLAK KYGSGATKYD PRK

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.