CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0186500-01	Rice	cytosol	75.92	74.83
KXG22876	Sorghum	cytosol	29.0	47.01
KXG20759	Sorghum	extracellular	45.02	42.23
KXG20758	Sorghum	cytosol	43.9	41.57
KXG20757	Sorghum	cytosol	44.01	41.46
KXG20754	Sorghum	extracellular	43.78	41.24
KXG20755	Sorghum	cytosol	42.67	40.23
KXG26778	Sorghum	cytosol, plastid	35.16	33.51
EES08313	Sorghum	cytosol	32.59	32.81
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	28.22	32.39
OQU84545	Sorghum	cytosol, endoplasmic reticulum	33.03	32.24
EES09588	Sorghum	cytosol	32.7	32.23
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.81	32.2
EES09609	Sorghum	cytosol	31.8	31.31
EER94459	Sorghum	extracellular, vacuole	32.14	31.26
KXG33491	Sorghum	cytosol	28.67	30.73
AT3G07040.1	Thale cress	cytosol	31.24	30.13
PGSC0003DMT400047578	Potato	plasma membrane	31.69	29.98
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.24	29.97
EES08155	Sorghum	cytosol	30.12	29.5
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	31.47	29.27
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.46	29.15
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.79	28.51
KXG28194	Sorghum	endoplasmic reticulum	30.24	28.45
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.23	28.19
OQU83246	Sorghum	endoplasmic reticulum	26.09	28.11
OQU83240	Sorghum	cytosol, extracellular	31.58	28.06

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8060770	UniProt:C5XB77
EnsemblPlants:EER95978	ProteinID:EER95978	ProteinID:EER95978.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF19	InterPro:RX-like_CC
EnsemblPlantsGene:SORBI_3002G058400	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0001A82F18	RefSeq:XP_002459457.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:5648922..5652923

Molecular Weight (calculated)

102415.0 Da

IEP (calculated)

8.373

GRAVY (calculated)

-0.193

Length

893 amino acids

Sequence
(BLAST)

001: MAEALVIVVL QKITSALGAE GLKIIGSKLQ KQVPDVQEVI NRMRLLQSDL SMMQAFISQV DAHSSSDKLL GAWLEQVRQA AHDAEDIVDE YIYLVGQMEG
101: TNSFLKRALN QAADVKRWRK LAADAKFVED CLKKITETKD RFDVSAADSR RDNALSYSSR FQHMSEHSYL NDDFVGNKEE VKCLTEWLSD LRKDRTVISI
201: CGMGGLGKTT IASSIYKKEE IKRMFICRAW ISVSQSYRVK DLLQKLLLQL ISKNENIPDG LDTMDCVNLV ELLRRYLKDR KYLIVLDDVW SRDSWPLLDS
301: AFVKNDNGSR IIVTTRIQAV ASVADSNREM KLSLLPKEEA WTLFCQKAFT RLDDRSCPLS LKTCAERIVG KCQGLPLALV ALGSLLSYKE MDEHEWELFY
401: RQLRWQLSSN PISYNDLPSY LKNCFLYLGL FPEDYQIERK QLIRLWIAEG FVEDRGPEVT LADVAACYLK ELTDRSLLQV VDRNEYGRPK RFQMHDLVRE
501: ISLTISKKEK FAITWDYPNS DSSSDGSRRV SVQKDGILMP VKTSAQFRSI IMFVEEVSSS WFRDCYPSFR LLRVLSLRHC HIQKIPDIMS NLFNLHYLDL
601: GYTLLKEIPR SIGKLSNLQT LYLKGSVLEL PSEVTMLTKL QHLIIDVGRF GSSASNKICR QEHLQTLKYI EANSCVVRNL GCLTRIRSLG IRKVLESYNT
701: DLWTSVSNMK ALAALSVISA DRDRDILDLS DLKPLPYLEK LMLSGRLDKG AIPPPFGHFP RLKSLRLCFS GLHEDPLALL AVMFQNLGHL NLYRCYDGTR
801: LTFRARWFPM LKHLYLSSMG ELKEVEIEDG TMRALRRLEL WGLKSLTSVP EGLVHLKSLQ QLCIGSMMPE EFKTRLEGRD RWIIEHIPYI GDP

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.