CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, endoplasmic reticulum, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G413600.1	Wheat	plastid	57.2	70.34
TraesCS2B01G435600.1	Wheat	cytosol, plastid	65.74	66.67
HORVU2Hr1G098100.2	Barley	cytosol	57.2	65.93
TraesCS2A01G416600.1	Wheat	plastid	64.78	65.69
Os10t0162854-01	Rice	cytosol	44.29	64.04
TraesCS1D01G064200.1	Wheat	plastid	51.01	62.0
TraesCS6B01G153000.1	Wheat	cytosol	59.55	58.61
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	58.16	57.55
GSMUA_Achr9P12800_001	Banana	cytosol	39.27	39.87
GSMUA_Achr5P04240_001	Banana	cytosol	37.57	39.68
EER95978	Sorghum	cytosol	33.51	35.16
EES08155	Sorghum	cytosol	34.04	34.98
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.62	33.76
KXG22876	Sorghum	cytosol	19.64	33.39
KXG20755	Sorghum	cytosol	33.62	33.26
KXG20758	Sorghum	cytosol	33.3	33.09
EER94459	Sorghum	extracellular, vacuole	32.34	33.01
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.55	32.69
AT3G07040.1	Thale cress	cytosol	32.02	32.4
Solyc08g005440.2.1	Tomato	cytosol, extracellular	32.12	32.33
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	32.98	32.19
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.8	32.18
KXG20757	Sorghum	cytosol	32.55	32.17
KXG20754	Sorghum	extracellular	32.55	32.17
PGSC0003DMT400047578	Potato	plasma membrane	32.23	31.99
KXG20759	Sorghum	extracellular	31.91	31.41
EES09609	Sorghum	cytosol	29.99	30.98
OQU84545	Sorghum	cytosol, endoplasmic reticulum	29.78	30.49
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.56	30.44
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.08	30.21
EES08313	Sorghum	cytosol	28.39	29.99
KXG33491	Sorghum	cytosol	25.83	29.05
EES09588	Sorghum	cytosol	27.96	28.92
KXG28194	Sorghum	endoplasmic reticulum	27.96	27.61
OQU83240	Sorghum	cytosol, extracellular	29.24	27.26
OQU83246	Sorghum	endoplasmic reticulum	24.12	27.26

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PM90	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0043531	InterPro:IPR032675
InterPro:IPR036388	EnsemblPlants:KXG26778	ProteinID:KXG26778	ProteinID:KXG26778.2	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF31	InterPro:RX-like_CC
EnsemblPlantsGene:SORBI_3006G168500	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000B8B9F7F	InterPro:WH-like_DNA-bd_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:52584325..52587620

Molecular Weight (calculated)

105551.0 Da

IEP (calculated)

8.828

GRAVY (calculated)

-0.053

Length

937 amino acids

Sequence
(BLAST)

001: MAEMIAVSLS AKAAASLSEP AAVELSSLFA IRSGVAAAVR ELELLRAFLR FADSRCGTDD LAVAWINQVR NAAFELEDVV DEYSYLSGRG FIRSCANLGA
101: WFALSRRLRK ARDRLRELSG AKAQYGILPA ISSAGAERSS AVGGSATFIS RKVADTAHFL GKEDIVGFAA QRSLLMEWLT EDMEPRRTLV AVWGMGGVGK
201: TTLVTNVFRE VAASFHFDCA AWVSVSKNFT REDLLKRVLK ELQRDVSAGV PKDVEETSYR SLVEVLQGIL SKKRYLVLLD DVWDAAAWYE IRSAFVDDGT
301: RSRIIITTRS QDVANLAKST RTILLKPLPE KEAWCLFCNT TFREDADREC PQHLEHWALR ILNKCSGLPL AIVSVGNVLA LKEKSEFAWK SVHDSLVWDE
401: STDHGIGQVS SILNLSIDDL PYHLKRCFLY CSIYPEDFFV KRKILIRKWI AEGFVEEKNH ATMEDVADDY LNQLVQRSLL QVVMKNEFGR AKRFQIHDLI
501: RELILSRSAK EGHFVFSKCT ATFESNSNFR HLIIDRCRSS DIPAPKMASL RSLHGFKTDL DASLLSSFRL LTVLDLWYVP INKLPSAVTN LFNLCYLGIR
601: STLIKELPHE LGRLHKLQTL DAKWSMVQRL PSNITKLKSL RHLILFRRYA ADFRFLYPGK AVVLPDGMRN LTCLQTLKYI EANEETVRSL GSLKQMRSLE
701: LCGVHEGNLI HLPSSISKMS YLQCLGIVSR DADVQLDLES FSPPPVKLQK FTLAGRLVGN KLPSWFRHLS GLMQLKLHSS KLKEDSIGLL SALPRLFDLS
801: LMDAYEEKSL VFAAGVFPVL RKLRLGDLAN LSHLEFQQGS LVNLDKLMLR QCFELTKIPQ GIENLVHLQN LELCDMPIEL TDKIQKGQGS EGKHQDALHT
901: TIVKVLRESP MKSWCGYLCV TNRGAYLIAR HEHGTVK

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.