Factsheet for TraesCS2D01G413600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G435600.1	Wheat	cytosol, plastid	97.24	80.19
HORVU2Hr1G098100.2	Barley	cytosol	79.92	74.91
TraesCS2A01G416600.1	Wheat	plastid	89.63	73.92
Os10t0162854-01	Rice	cytosol	58.53	68.83
TraesCS1D01G064200.1	Wheat	plastid	66.54	65.76
KXG26778	Sorghum	cytosol, plastid	70.34	57.2
GSMUA_Achr9P12800_001	Banana	cytosol	43.18	35.64
GSMUA_Achr5P04240_001	Banana	cytosol	40.94	35.17
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	24.8	33.27
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	30.84	32.87
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	33.99	32.7
TraesCS5D01G422100.1	Wheat	cytosol	28.08	32.42
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	16.93	31.31
TraesCS7D01G416200.1	Wheat	extracellular	35.7	30.73
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	24.93	30.11
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	15.35	30.08
TraesCS1D01G018800.1	Wheat	cytosol	24.93	30.06
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	24.15	29.82
TraesCS2D01G064200.1	Wheat	cytosol	35.96	29.69
TraesCS7D01G040500.1	Wheat	cytosol	32.15	29.41
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	35.17	29.23
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	22.83	29.05
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	35.04	28.96
TraesCS3D01G001100.1	Wheat	cytosol	26.38	28.71
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	34.51	28.71
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.38	28.57
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	12.07	28.48
TraesCS7D01G140100.1	Wheat	cytosol	34.25	28.46
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	33.86	28.45
TraesCS7D01G040700.1	Wheat	cytosol	33.86	28.17
Solyc08g005440.2.1	Tomato	cytosol, extracellular	34.38	28.14
PGSC0003DMT400047578	Potato	plasma membrane	34.65	27.97
TraesCS2D01G504500.1	Wheat	cytosol	33.6	27.92
TraesCS7D01G436600.1	Wheat	cytosol	33.07	27.48
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	32.02	27.42
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	32.81	27.17
TraesCS3D01G001700.1	Wheat	cytosol	32.94	26.93
TraesCS3D01G440400.1	Wheat	cytosol	31.5	26.4
AT3G07040.1	Thale cress	cytosol	31.5	25.92
TraesCS4D01G088900.1	Wheat	cytosol	30.97	25.88
TraesCS3D01G440300.1	Wheat	cytosol	30.71	25.8
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	30.97	25.76
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	31.23	25.65
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	30.58	25.49
TraesCS1D01G017600.1	Wheat	cytosol	30.71	25.35
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	29.92	25.33
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.45	25.08
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	30.84	25.03
TraesCS3D01G310100.1	Wheat	cytosol	28.48	24.66
TraesCS1D01G017400.1	Wheat	cytosol	16.14	24.07
TraesCS1D01G014700.1	Wheat	peroxisome	15.22	23.77
TraesCS1D01G454100.1	Wheat	cytosol	28.87	23.5
TraesCS7D01G040100.1	Wheat	cytosol	10.24	20.37
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	9.45	20.28
TraesCS7D01G041000.1	Wheat	plastid	9.19	20.17
TraesCS1D01G016400.1	Wheat	cytosol	9.32	16.71

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF31	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2D01G413600	EnsemblPlants:TraesCS2D01G413600.1	InterPro:WH-like_DNA-bd_sf	TIGR:cd14798
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:528077104..528079498

Molecular Weight (calculated)

85337.3 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.083

Length

762 amino acids

Sequence
(BLAST)

001: MAEMIAISLS AKVAATLSRS PAADISSLVA VRSGISAAAR DLELLRAFLR FADSRRGADA LASAWVDQIR DVGFELEDAA DEYAFLSGGG FVRACANFGA
101: WLALARRLGK ARARLRDLSD AKERYGIRPA EASESSSAPD GGSAAVVGRK LAEAAHFLQD GEIVGFAAHR RSLMKWLTED LDSRRSLVAV CGMGGVGKTT
201: LVTSVYKEVA SSRHFDCAAW VSVSKNFTTD DLLRKIAKEL HRDARAGMPD IDEMDYRSLV EALRGHLAKK RYLLLLDDVW DADAWYEIRN ALVDDGTGSR
301: IIITTRSQDV ASLAASTRTI MLEPLPEQEA WSLFCNTTFR EDANRECPHH LEHWALKILG RCCGLPLAIV SVGNLLALKD RTEFAWKNVH DSLDWNESSV
401: RGIGQVSSIL NLSIDDLPYH LKRCLLYCSI YPEDFLIKRK ILIRLWIAEG YFEEKGQGTM EEIADDYLHQ LVQRSLLQVT LKNEFGRAKR LCIHDLIRDL
501: ILQRSAKEGF TVFSKCQLTL ESSKKIRHLI LDRWASDHRP VPKMTLLRSF SAFKSDMDSS VLSGFRLLTV LNLWFVQIDK LPSSLTKLLN LRYLGIRSTL
601: IEELPQDLGQ LHNLQTLDTK WSRVQRLPPS IRKLDNLRHL IVFRRRSADF SSPFPGTAIE FPDGLQNLTC LQTLKYIEAD EKMVKSLKSL KHMKSLELSG
701: VHESNLIHLP SSISTMSGLL CLGIVSRDAN VILDLEPFYP PPLKLQRLSL TGMLAKGCYI LP

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.