Factsheet for TraesCS1D01G015500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G017400.1	Wheat	cytosol	54.15	97.06
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	96.29	96.29
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	80.9	81.07
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	83.41	80.76
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	79.8	77.85
TraesCS1D01G454100.1	Wheat	cytosol	65.07	63.68
Os11t0229300-00	Rice	cytosol	43.67	61.44
Os11t0227700-01	Rice	cytosol	42.58	60.28
TraesCS4D01G088900.1	Wheat	cytosol	58.19	58.44
TraesCS3D01G440300.1	Wheat	cytosol	57.64	58.21
EES09609	Sorghum	cytosol	56.88	57.44
TraesCS3D01G440400.1	Wheat	cytosol	56.66	57.1
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	53.49	54.44
TraesCS7D01G140100.1	Wheat	cytosol	36.9	36.86
TraesCS2D01G504500.1	Wheat	cytosol	36.03	35.99
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.92	35.88
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	35.48	35.48
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	35.26	35.22
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	15.83	35.19
TraesCS1D01G018800.1	Wheat	cytosol	24.24	35.13
TraesCS2D01G064200.1	Wheat	cytosol	35.37	35.1
TraesCS7D01G040700.1	Wheat	cytosol	35.04	35.04
TraesCS7D01G436600.1	Wheat	cytosol	34.93	34.9
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	30.13	34.85
TraesCS7D01G040500.1	Wheat	cytosol	31.66	34.81
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	33.52	34.49
TraesCS5D01G422100.1	Wheat	cytosol	24.34	33.79
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	20.85	33.63
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	23.03	33.44
TraesCS7D01G041000.1	Wheat	plastid	12.66	33.43
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	25.76	33.01
TraesCS7D01G040100.1	Wheat	cytosol	13.76	32.9
TraesCS3D01G001100.1	Wheat	cytosol	24.56	32.14
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	12.45	32.11
TraesCS7D01G416200.1	Wheat	extracellular	30.9	31.98
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	21.4	31.77
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	20.63	31.55
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	30.79	31.09
TraesCS2D01G413600.1	Wheat	plastid	25.76	30.97
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	31.0	30.6
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	30.46	30.33
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.57	30.27
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	30.46	30.26
TraesCS1D01G017600.1	Wheat	cytosol	30.46	30.23
TraesCS1D01G064200.1	Wheat	plastid	25.44	30.22
TraesCS1D01G014700.1	Wheat	peroxisome	15.94	29.92
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	10.37	29.41
TraesCS3D01G001700.1	Wheat	cytosol	29.69	29.18
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.15	28.68
PGSC0003DMT400047578	Potato	plasma membrane	28.93	28.07
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.9	28.02
AT3G07040.1	Thale cress	cytosol	27.51	27.21
TraesCS1D01G016400.1	Wheat	cytosol	12.45	26.82
TraesCS3D01G310100.1	Wheat	cytosol	25.44	26.48

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1D01G015500	EnsemblPlants:TraesCS1D01G015500.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1D:-:7277605..7280355

Molecular Weight (calculated)

103225.0 Da

IEP (calculated)

7.947

GRAVY (calculated)

-0.181

Length

916 amino acids

Sequence
(BLAST)

001: MAEAILLAVS KIGTIVLNEV VTDVVQKLSR KLDALKELPA KVQRIEIELN TMNDIIQDLG STNLNNNVIK GWIGNVRKLA YRVEDVIDKY SYEALKLKDE
101: GFLHRYIITG SRHVKVFSKI AEEVEEIEKD IVQIKGLPKY WRDTNQPNKN EHAKIDKQRS GSCFPELFSD EDLVGIDENR SKLIEWLATK DKESTVITVS
201: GMGGLGKTTL VKNVYDREKV NFADAHAWIV VSKEYDVIDL LGTLLTKIRH TQESTAPPPL SVGAKSDVYD LTEAINKIVQ EKKCLIVLDD VWNKDAYNQM
301: CNAFQGIHGS RVMITTRMED VAALAQPKRR LVLQPLGSTE SFKLFCSRAF HSNLNRECPL ELNTVATKVV ERCRGLPLAI VSSGSLLSTK QPTEHAWNHM
401: FNHLRSELRG DNHVQPILDL SYHDLPGDLR NCFLYCSLFP EDYAISRESL VRLWVAEGFA VKKENSTPEE VAEGNLMELI GRNMLEVVER DELLRVSTCK
501: MHDLVRDLAL AVAKQERFGS AKAPKELIHM GKEVRRFSTC GWTDSKAIVG VKFPRLRTIM SLATASPCTN MLSSVLSGSS YLTVLELQDS AITQVPASIG
601: DLFNLRYIGL RRTNIQSLPH TIDKLSNLET LDIKQTKVEK LPPGIVHIEK LRHLLADRFA DEKQTEFRYF VGVEAPHMIS NFQELQTLET VHASKDLSLQ
701: PQKMMKLHTV WVDNINASNC DYLLKTLSDM PLLSSLLLSA CDENETLSFQ ALKPVSTNLH RLIIRGGWAD GTLKCPIFQG HGKSLKYLAL SWCNLGIEDP
801: QQLLASHLPD LTYLSLNRVS SAGILVLSAG CFPKLKTLVL KRMPNVKQLE IKKGAIPAID GIYIVSLSKL NMVPHGIESL ETLKKLWMLD LHKDFKAQWN
901: LNQMHNKMKD VPELRV

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.