Factsheet for TraesCS1B01G021900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G017400.1	Wheat	cytosol	53.93	96.67
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	96.29	96.29
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	81.77	82.22
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	83.95	81.29
TraesCS1B01G032700.2	Wheat	mitochondrion	52.84	78.32
Os11t0229300-00	Rice	cytosol	44.43	62.52
Os11t0227700-01	Rice	cytosol	43.56	61.67
TraesCS4B01G091600.1	Wheat	cytosol	43.56	61.38
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	59.39	58.24
EES09609	Sorghum	cytosol	56.99	57.55
TraesCS3B01G483700.1	Wheat	cytosol	57.31	56.7
TraesCS2B01G504900.1	Wheat	cytosol	54.26	55.22
TraesCS3B01G483600.1	Wheat	cytosol	29.8	53.63
TraesCS1B01G377400.1	Wheat	cytosol	46.62	48.47
TraesCS1B01G030900.1	Wheat	cytosol	17.58	38.8
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	36.24	36.2
TraesCS7B01G345300.1	Wheat	mitochondrion	26.86	35.29
TraesCS5B01G416800.1	Wheat	cytosol	32.1	35.25
TraesCS6B01G030900.1	Wheat	cytosol	31.66	34.86
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	35.15	34.7
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	34.28	34.51
TraesCS2B01G058900.1	Wheat	cytosol	33.3	33.37
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.25	33.23
TraesCS1B01G022200.1	Wheat	cytosol	23.8	33.08
TraesCS2B01G007600.1	Wheat	mitochondrion	15.39	32.27
TraesCS5B01G301500.1	Wheat	plasma membrane	29.26	32.1
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	24.78	31.62
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.66	31.32
TraesCS2B01G225000.1	Wheat	cytosol	29.59	31.29
TraesCS7B01G323800.1	Wheat	extracellular	31.99	31.17
TraesCS3B01G040100.1	Wheat	cytosol	29.37	30.99
TraesCS1B01G020900.1	Wheat	cytosol	14.08	30.79
TraesCS7B01G324300.1	Wheat	extracellular	31.55	30.74
TraesCS2B01G435600.1	Wheat	cytosol, plastid	29.69	29.44
TraesCS6B01G161400.1	Wheat	cytosol	29.04	29.04
TraesCS1B01G020300.1	Wheat	cytosol	30.24	28.94
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.26	28.79
TraesCS6B01G153000.1	Wheat	cytosol	29.8	28.68
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	29.37	28.41
PGSC0003DMT400047578	Potato	plasma membrane	28.93	28.07
AT3G07040.1	Thale cress	cytosol	28.06	27.75
TraesCS3B01G344500.1	Wheat	cytosol	25.44	26.48

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G021900	EnsemblPlants:TraesCS1B01G021900.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1B:+:9989595..9992345

Molecular Weight (calculated)

103374.0 Da

IEP (calculated)

7.318

GRAVY (calculated)

-0.173

Length

916 amino acids

Sequence
(BLAST)

001: MAEAILLAVS KIGTIVLNEV VTDVVQKLSR KLDALKELPA KVQRIEIELN TMNDIIQDLG STNLNNNVIK GWIGNVRKLA YRVEDVIDKY SYEALKLKDE
101: GFLHRYIITG SRHVKVFSKI AEEVEEIEKD IVQIKGLPKY WRDTNEPNKN DHAKIDKQRS GSCFPELFSD EDLVGIDENR SKLIEWLATK DKESTVITVS
201: GMGGLGKTTL VKNVYDREKV NFPDAHAWIV VSKEYDVIDL LGTLLTKIQH RQESMTPPPL SVGAKSDVYD LTEAINKILQ DKKCLIVLDD VWSKDAYNQM
301: CNAFQGIHGS RVMITTRMED VAALAQPKRR LVLQPLGSTE SFKLFCSRAF HSNLNRECPL ELKTVATKVV ERCRGLPLAI VSSGSLLSTK QPTEHAWNHM
401: FNHLRSELRG DNHVQPILDL SYHDLPGDLR NCFLYCSLFP EDYAISRESL VRLWVAEGFA VKKENSTPEE VAEGNLMELI GRNMLEVVER DELLRVSTCK
501: MHDLVRDLAL AVAKEERFGS ANGPKEMIRM DKEVRRFSTC GWIDSKAIVG VKFPRLRTIM SLATASPCTN MLSSVLYGSS YLTVLELQDS AITQVPASIG
601: DLFNLRYIGL RRTNIQSLPH TIDKLSNLET LDIKQTKVEK LPPGIVNIEK LRHLLADRFA DEKQTEFRYF VGVEAPHMIS NFQELQTLET VHASKDLSLQ
701: LQKMMKLQTV WVDNISASNC DDLLKTLSDM PLLSSLLLSA CDENETLSFQ ALKPVSTYLH RLIIRGGWAD GTLNCPIFQG HGKSLKYLAL SWCDLGMEDP
801: LRLLASHLPD LTYLSLNRVS SAGILVLSAG CFPKLKTLVL KRMPNVKQLE IEKGAIPDID GIYIVSLSKL NMVPHGIESL GTLKKLWMLD LHKDFKAQWN
901: LNQMHNKMKA VPELRV

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.