Factsheet for TraesCS1B01G021500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.17	67.39
TraesCS1B01G022200.1	Wheat	cytosol	59.75	65.1
TraesCS1B01G030900.1	Wheat	cytosol	35.65	61.69
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	61.42	61.42
TraesCS1B01G020900.1	Wheat	cytosol	34.68	59.43
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	73.96	57.34
TraesCS1B01G020300.1	Wheat	cytosol	74.09	55.59
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.08	44.69
EES08155	Sorghum	cytosol	56.41	44.41
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.24	44.05
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.55	43.84
TraesCS2B01G225000.1	Wheat	cytosol	50.7	42.03
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.43	41.46
TraesCS3B01G040100.1	Wheat	cytosol	43.73	36.18
TraesCS5B01G301500.1	Wheat	plasma membrane	32.45	27.9
TraesCS3B01G483600.1	Wheat	cytosol	19.64	27.7
TraesCS7B01G345300.1	Wheat	mitochondrion	26.18	26.97
TraesCS1B01G032700.2	Wheat	mitochondrion	22.7	26.38
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	33.7	26.08
TraesCS6B01G030900.1	Wheat	cytosol	29.67	25.6
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	32.17	25.38
TraesCS1B01G377400.1	Wheat	cytosol	31.06	25.31
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	32.31	25.3
TraesCS2B01G058900.1	Wheat	cytosol	32.17	25.27
TraesCS5B01G416800.1	Wheat	cytosol	29.25	25.18
TraesCS4B01G091600.1	Wheat	cytosol	22.56	24.92
AT3G07040.1	Thale cress	cytosol	32.03	24.84
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	31.62	24.78
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	31.34	24.7
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.48	24.27
TraesCS2B01G435600.1	Wheat	cytosol, plastid	31.06	24.13
PGSC0003DMT400047578	Potato	plasma membrane	31.48	23.94
TraesCS6B01G153000.1	Wheat	cytosol	31.62	23.84
TraesCS6B01G161400.1	Wheat	cytosol	30.36	23.8
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	31.2	23.65
TraesCS2B01G007600.1	Wheat	mitochondrion	14.35	23.57
TraesCS3B01G483700.1	Wheat	cytosol	30.08	23.33
TraesCS7B01G323800.1	Wheat	extracellular	30.5	23.3
TraesCS2B01G504900.1	Wheat	cytosol	29.11	23.22
TraesCS7B01G324300.1	Wheat	extracellular	30.22	23.09
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	29.53	22.7
TraesCS3B01G344500.1	Wheat	cytosol	27.58	22.5
KRG98601	Soybean	cytosol	11.84	22.49

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	InterPro:RX-like_CC	SUPFAM:SSF52047
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G021500	EnsemblPlants:TraesCS1B01G021500.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1B:+:9873736..9876030

Molecular Weight (calculated)

80674.2 Da

IEP (calculated)

7.149

GRAVY (calculated)

0.002

Length

718 amino acids

Sequence
(BLAST)

001: MAEGVVGLVV ATLGAALATE AATFGWSLLR KEAAAIRDVF GKIRQSKAEL ESMQAYLHKA ERFKDTDRTT DIFVGEIRGL AFQIEDVVDE FTYKLEDCKH
101: GGFTGKIRSK VTTVWGMPGV GKTTLVAHVY NMLKLDFDAA AWVTMLKSYC LKERLKKIAA EFGIAVDVAT SEMRGLAESI HNYLQGENFI VVLDDVWTPL
201: VWSEIRNVFP TSNCTGRFVI TSRKHEVSLL ATRESAIHLE PLQAYQSWLL FCKEAFWNND DKECPLELQE LARKLVAKCQ GLPIAIACIG RLLSWKQPTF
301: AEWEDVYRGL DSQFMKDVIP DAHMILKVSL EDLLYDKKNC FLHCALCPED HVLKRRKVMR QWITAGFIRE KEENKTLEEV AEGYLAELVN RSLLQVVKRN
401: HDGRLKHCRM HDVIRLLALN KAKEECFGKF YNSSASGALS VEGARRISVQ GENIEQLSRS GATHLCVLHV LGRCINVDFL KPILTSSKFL STLDLEGTHI
501: KMLPNEVFDL FNLRYLGLRD TKIESLPEAV GRLQNLEVLD ACESKLAYLP NNVVKLQKLR YLYAFTPGSP VNETGDGVKV PIGIQHMTAL HSLQCIKATP
601: EFLCEVGSLI ELRTLSVCNI RSEHSAGLSN AITKMSHLVH LEIIAAAESD VLQLDGLRLP PTLSWLCLGG RLEKISMPQL FSSWSHLNGL TRLQLGFSNI
701: DEQTFSCLFV YMVYALLG

Best Arabidopsis Sequence Match ( AT1G10920.1 )
(BLAST)

001: MKSLGIQEII DGASSMSLQE RQREQKEIRQ TFANSSESDL VGVEQSVEAL AGHLVENDNI QVVSISGMGG IGKTTLARQV FHHDMVQRHF DGFAWVFVSQ
101: QFTQKHVWQR IWQELQPQNG DISHMDEHIL QGKLFKLLET GRYLVVLDDV WKEEDWDRIK AVFPRKRGWK MLLTSRNEGV GIHADPKSFG FKTRILTPEE
201: SWKLCEKIVF HRRDETGTLS EVRVDEDMEA MGKEMVTCCG GLPLAVKVLG GLLATKHTVP EWKRVYDNIG PHLAGRSSLD DNLNSIYRVL SLSYENLPMC
301: LKHCFLYLAH FPEYYEIHVK RLFNYLAAEG IITSSDDGTT IQDKGEDYLE ELARRNMITI DKNYMFLRKK HCQMHDMMRE VCLSKAKEEN FLEIFKVSTA
401: TSAINARSLS KSRRLSVHGG NALPSLGQTI NKKVRSLLYF AFEDEFCILE STTPCFRSLP LLRVLDLSRV KFEGGKLPSS IGDLIHLRFL SLHRAWISHL
501: PSSLRNLKLL LYLNLGFNGM VHVPNVLKEM QELRYLQLPM SMHDKTKLEL SDLVNLESLM NFSTKYASVM DLLHMTKLRE LSLFITDGSS DTLSSSLGQL
601: RSLEVLHLYD RQEPRVAYHG GEIVLNCIHL KELELAIHMP RFPDQYLFHP HLSHIYLWCC SMEEDPIPIL ERLLHLKSVI LTFGAFVGRR MVCSKGGFPQ
701: LCFLKLEELE ELEEWIVEEG RCHFFVL

Arabidopsis Description

LOV1Putative inactive disease susceptibility protein LOV1 [Source:UniProtKB/Swiss-Prot;Acc:O04093]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.