Factsheet for TraesCS5B01G301500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0261000-01	Rice	plastid	63.95	68.55
TraesCS2B01G058900.1	Wheat	cytosol	51.02	46.61
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	41.08	37.4
TraesCS6B01G030900.1	Wheat	cytosol	36.77	36.9
TraesCS7B01G345300.1	Wheat	mitochondrion	30.78	36.87
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	40.6	36.53
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	39.76	36.48
TraesCS1B01G030900.1	Wheat	cytosol	17.6	35.42
TraesCS5B01G416800.1	Wheat	cytosol	35.09	35.13
TraesCS3B01G483600.1	Wheat	cytosol	21.32	34.97
TraesCS4B01G091600.1	Wheat	cytosol	26.35	33.85
TraesCS2B01G007600.1	Wheat	mitochondrion	17.37	33.18
TraesCS2B01G504900.1	Wheat	cytosol	35.69	33.11
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	27.9	32.45
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	35.93	32.12
TraesCS1B01G377400.1	Wheat	cytosol	33.65	31.9
TraesCS6B01G161400.1	Wheat	cytosol	34.97	31.88
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.43	31.83
TraesCS1B01G022200.1	Wheat	cytosol	24.91	31.56
TraesCS1B01G032700.2	Wheat	mitochondrion	22.99	31.07
TraesCS3B01G483700.1	Wheat	cytosol	33.65	30.35
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	33.05	30.3
TraesCS2B01G435600.1	Wheat	cytosol, plastid	33.29	30.09
TraesCS2B01G225000.1	Wheat	cytosol	30.78	29.68
TraesCS7B01G323800.1	Wheat	extracellular	33.29	29.57
TraesCS7B01G324300.1	Wheat	extracellular	33.29	29.57
TraesCS3B01G040100.1	Wheat	cytosol	30.42	29.26
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	32.1	29.26
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.98	28.83
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.5	28.25
TraesCS1B01G020900.1	Wheat	cytosol	14.13	28.16
PGSC0003DMT400047578	Potato	plasma membrane	31.5	27.86
TraesCS6B01G153000.1	Wheat	cytosol	31.38	27.52
TraesCS1B01G020300.1	Wheat	cytosol	31.38	27.38
AT3G07040.1	Thale cress	cytosol	30.06	27.11
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	30.66	27.03
TraesCS3B01G344500.1	Wheat	cytosol	27.78	26.36

Protein Annotations

EnsemblPlants:TraesCS5B01G301500.1	EnsemblPlantsGene:TraesCS5B01G301500	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF15	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:+:486077702..486080461

Molecular Weight (calculated)

95691.5 Da

IEP (calculated)

8.802

GRAVY (calculated)

-0.167

Length

835 amino acids

Sequence
(BLAST)

001: MAETAILLAV KKISIAMAGE ILSLAKPMFR NKSELVAALP SNMELVKEEL EIIHAFIKKI STTQCNDIVL ETWLRQARRL AYDVEDIVDQ FIYIVGESQV
101: ASCVSNLKKL FKKPQSLFSL DRMATEVEKV KHRLRELSAR RDRWVQSNAS ALDVEIPNYD NKQEAYQFRH SQSDNEDDYV GVDKYREILN KLLYSEDCSL
201: CFIAVCGMGG LGKSSLVHSV YKRELSHFDC RAWISVSQSC KIDDILRNML KQFRGNDDKV QSEVGKMNIE ELRTELKKFL EQKRFMIVLD DVWRGAVALE
301: IRNLLSNCGR RSRVVITTRI DEVASIAEDA CKIRLEPLNK QDAWILFCRK VFWKIQNHIC PPELQRWGEM IVNKCAGLPL ALVALGGLLS LRDKSEAEWK
401: SLYSKLTCEL HDNPDINHVE WILNLSYRHL PDYLQNCFLF CAMFPEGRLL KKKKLIRLWI AEGFVEQRGT ISLEEVAESY LIELVHRSML QVVERNSFGR
501: IRHFRMHDLV RELAIKLSEK ECFSSRYDDT SGVTQIVPDS RRVSVLRCKT DIRLTLESSR LRTLLAFDRT MLHCSWSHYI PSKSKYLAVL DLSGLPIETI
601: SHSIGELFNL KYLCLNDTNV KSLPKTVSRL QNLETLSLKR TQLISFPAGF AKLKKLRHVH VWKLLDNAQS SFSQSLGVRT TDGLCNLKEL QTLDEVQANE
701: QFVSKMGNLA HLRSLYISDV RSKYCSQLCL STSKMQHLIR LHVKASNQGE VLRLESLTLP SQLQTLELTG QLLGGVLQSP FFSAHANTLV RLSLCWCNFA
801: ENPMPHLSKL SNLTSLRLRM AYTGQQLGFG AGWFP

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.