Factsheet for TraesCS1B01G020400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	94.95	94.64
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	84.96	81.82
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	82.22	81.77
TraesCS1B01G032700.2	Wheat	mitochondrion	53.68	79.13
Os11t0229300-00	Rice	cytosol	45.77	64.06
Os11t0227700-01	Rice	cytosol	44.13	62.13
TraesCS4B01G091600.1	Wheat	cytosol	42.7	59.85
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	59.17	57.71
TraesCS3B01G483700.1	Wheat	cytosol	58.18	57.24
EES09609	Sorghum	cytosol	56.97	57.22
TraesCS2B01G504900.1	Wheat	cytosol	55.65	56.33
TraesCS3B01G483600.1	Wheat	cytosol	30.63	54.81
TraesCS1B01G377400.1	Wheat	cytosol	46.98	48.58
TraesCS1B01G030900.1	Wheat	cytosol	17.23	37.83
TraesCS7B01G345300.1	Wheat	mitochondrion	27.77	36.3
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	36.22	35.99
TraesCS5B01G416800.1	Wheat	cytosol	32.71	35.73
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	35.78	35.13
TraesCS6B01G030900.1	Wheat	cytosol	31.83	34.86
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	34.58	34.62
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.38	33.23
TraesCS2B01G058900.1	Wheat	cytosol	33.26	33.15
TraesCS5B01G301500.1	Wheat	plasma membrane	30.3	33.05
TraesCS1B01G022200.1	Wheat	cytosol	23.6	32.63
TraesCS2B01G007600.1	Wheat	mitochondrion	15.48	32.27
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	32.05	31.53
TraesCS2B01G225000.1	Wheat	cytosol	29.86	31.41
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	24.7	31.34
TraesCS3B01G040100.1	Wheat	cytosol	29.42	30.88
TraesCS7B01G323800.1	Wheat	extracellular	31.72	30.74
TraesCS1B01G020900.1	Wheat	cytosol	14.05	30.55
TraesCS7B01G324300.1	Wheat	extracellular	31.28	30.32
TraesCS2B01G435600.1	Wheat	cytosol, plastid	30.3	29.87
TraesCS1B01G020300.1	Wheat	cytosol	30.3	28.84
TraesCS6B01G161400.1	Wheat	cytosol	28.54	28.38
TraesCS6B01G153000.1	Wheat	cytosol	29.42	28.15
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	29.2	28.09
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.43	27.82
PGSC0003DMT400047578	Potato	plasma membrane	28.54	27.54
TraesCS3B01G344500.1	Wheat	cytosol	26.45	27.39
AT3G07040.1	Thale cress	cytosol	27.66	27.21

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G020400	EnsemblPlants:TraesCS1B01G020400.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1B:-:9555828..9558563

Molecular Weight (calculated)

102590.0 Da

IEP (calculated)

7.429

GRAVY (calculated)

-0.179

Length

911 amino acids

Sequence
(BLAST)

001: MAEAILLAVS KIGAVILNQA VTDVVQKLSK VAALKELPTK VTRINVELTT MNNIILDLGT THLSNNVIKG WIGNVRDLAY RVEDVIDKYS YEALKLKDEG
101: FLQRYIFRGS RHIKVFSQIA EEIENIEKDI MQIKELPKYW RDTVQPRNND HAKIDKTRSG SCFPGLFSDE DLVGIDENRS KLTEWLSTDD KGSSVITVSG
201: MGGLGKTTLV KNVYDREKVN FPDAHAWIVV SQAYDVVDLL GSLLTKLQLT QGTQSPLSMD AKANVYDLTE AIRKTLQDRK CLIVLDDVWD KDAYTQMCNA
301: FQGLQGSRVV ITTRKEDVAA LASPRRRLVL QPLGSAESFK LFCSRAFHNS PNHECPPELK AVAVDVVKKC HGLPLAIISS GSLLSTKQPT EYVWNQMFEQ
401: LRDEFKGDNN VQAILNLSYH DLPGDLRNCF LYCSLFPEDY AMSRESLVRL WVAEGFVMRK GNNMPEEVAE GNLMELIGRN MLEVVEWDEL FRVSKCKMHD
501: IVRDLALAVA KKERFGSAND SGEMISMEKE VRRLSTSSGW TADPRVEFPR LRTIMSLATA SSSTNMLSSV FSGSSYLTVL ELQDSAITEV PASIGNLFNL
601: RYIGLRRTNV QSLPDTIEKL LNLETLDIKQ TRVEKLPPGI VKVEKLRHLF ADRFADEKQT EFRYFVGIEA PHMISNFQEL QTLETVHASK DMSMELKKMR
701: KLQTVWVDNI NASNCDDLFK TLSDMPLLSS LLLSAYDETE KLSFQSLVPI SKKLHRLIVR GGWADGTLKC PIFQGHGRNL KYLALSWCNL GKEDPLQLLA
801: SHLPALTYLS LNRVSSAAIL VLSAGSFSKL KTLVLKCMPN VKQLEIEEGA IPHIDGIYIV SLSELNTVPH GIESLGTLKK LWMLGLHKDF KAQWNLNQMH
901: NKMKHVPELR S

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.