Factsheet for TraesCS1B01G020900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	47.97	62.23
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.24	51.79
TraesCS1B01G022200.1	Wheat	cytosol	78.76	50.08
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	59.43	34.68
TraesCS1B01G020300.1	Wheat	cytosol	77.57	33.96
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	72.79	32.94
TraesCS1B01G030900.1	Wheat	cytosol	28.64	28.92
TraesCS2B01G225000.1	Wheat	cytosol	51.79	25.06
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.61	24.97
EES08155	Sorghum	cytosol	54.18	24.89
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.13	24.76
TraesCS3B01G483600.1	Wheat	cytosol	29.59	24.36
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.51	23.76
KRG98601	Soybean	cytosol	20.76	23.02
TraesCS3B01G040100.1	Wheat	cytosol	45.82	22.12
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	50.36	21.98
TraesCS5B01G416800.1	Wheat	cytosol	30.07	15.11
TraesCS6B01G030900.1	Wheat	cytosol	29.83	15.02
TraesCS1B01G377400.1	Wheat	cytosol	30.55	14.53
TraesCS2B01G435600.1	Wheat	cytosol, plastid	31.98	14.5
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	31.74	14.33
TraesCS5B01G301500.1	Wheat	plasma membrane	28.16	14.13
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	30.79	14.08
TraesCS6B01G161400.1	Wheat	cytosol	30.79	14.08
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	30.55	14.05
AT3G07040.1	Thale cress	cytosol	31.03	14.04
TraesCS7B01G323800.1	Wheat	extracellular	31.26	13.94
TraesCS6B01G153000.1	Wheat	cytosol	31.5	13.87
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.55	13.75
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	30.07	13.74
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	31.03	13.73
TraesCS7B01G324300.1	Wheat	extracellular	30.55	13.62
TraesCS3B01G483700.1	Wheat	cytosol	30.07	13.61
PGSC0003DMT400047578	Potato	plasma membrane	30.31	13.45
TraesCS2B01G504900.1	Wheat	cytosol	28.88	13.44
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	28.64	13.19
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	29.36	13.17
TraesCS2B01G058900.1	Wheat	cytosol	28.4	13.02
TraesCS3B01G344500.1	Wheat	cytosol	26.49	12.61
TraesCS7B01G345300.1	Wheat	mitochondrion	19.33	11.62
TraesCS4B01G091600.1	Wheat	cytosol	16.71	10.77
TraesCS1B01G032700.2	Wheat	mitochondrion	15.51	10.52
TraesCS1D01G014700.1	Wheat	peroxisome	10.26	8.81
TraesCS2B01G007600.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1B01G020900.1	EnsemblPlantsGene:TraesCS1B01G020900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886
PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr1B:-:9691698..9692957

Molecular Weight (calculated)

47915.8 Da

IEP (calculated)

7.521

GRAVY (calculated)

-0.306

Length

419 amino acids

Sequence
(BLAST)

001: MQAYLQEAEQ FKDTDKTTAI FIGKIRGLAF QIEDVVDEFN YKLEDCKHGR FTGKMKKRLK HIKTWRRLAA KLQEIEAQLQ DANRRKKDYA VTGRSASAAR
101: STREGQALHF TRDEDLVRIE EHKEGLIQWL NGGGDDPERS SSKVTMVWGM PGVGKTTLVD HVYNTVKADF DGAACVTVSG SYRIENLLKK IAAQFNITVD
201: VTTVEMRGLA KSILNYLQGK KYILILDGVW DEHLWSEIRD VFPTSNCTGR FVITSRKQVV LATRESAYAI HLELLQEHYS WLLFTNEAFG NADDKECPLE
301: LQELARKFIA KCQGLPISIR CIGRLLSLKP PISAEWEDVY RGLDLQMAKD VIPDAHMILK VSLEALPYNL KNCFIHCALF PDDYVLKRMK MIRQWIAAGF
401: IWEKDDSKTL EEVPEGYLV

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.