CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08155	Sorghum	cytosol	74.81	76.54
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.1	76.1
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.88	67.39
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	63.88	62.08
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.41	58.81
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	20.15	58.2
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	44.69	58.08
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	57.45	57.88
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	44.48	57.8
TraesCS1B01G022200.1	Wheat	cytosol	40.73	57.66
TraesCS1A01G018400.2	Wheat	cytosol	56.59	57.52
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	57.13	57.37
TraesCS1D01G017600.1	Wheat	cytosol	56.48	57.1
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.16	56.65
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	55.52	56.12
TraesCS1D01G014700.1	Wheat	peroxisome	29.26	55.94
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	55.31	55.84
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	55.41	55.71
TraesCS1B01G020900.1	Wheat	cytosol	24.97	55.61
TraesCS1A01G016200.1	Wheat	cytosol	56.38	55.25
HORVU1Hr1G002620.1	Barley	cytosol	28.4	55.21
TraesCS1D01G016400.1	Wheat	cytosol	24.87	54.59
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	54.45	54.27
TraesCS1B01G020300.1	Wheat	cytosol	55.09	53.71
EER94459	Sorghum	extracellular, vacuole	52.63	53.49
KXG26778	Sorghum	cytosol, plastid	33.76	33.62
KXG22876	Sorghum	cytosol	19.29	32.67
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	26.26	31.49
AT3G07040.1	Thale cress	cytosol	30.65	30.89
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.65	30.72
EES09609	Sorghum	cytosol	29.8	30.65
EER95978	Sorghum	cytosol	29.15	30.46
EES09588	Sorghum	cytosol	29.37	30.24
PGSC0003DMT400047578	Potato	plasma membrane	30.33	29.98
KXG20758	Sorghum	cytosol	30.23	29.9
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.15	29.89
KXG33491	Sorghum	cytosol	26.47	29.65
EES08313	Sorghum	cytosol	28.19	29.65
KXG20754	Sorghum	extracellular	29.9	29.43
KRG98601	Soybean	cytosol	11.79	29.1
KXG20759	Sorghum	extracellular	29.58	28.99
KXG20757	Sorghum	cytosol	29.15	28.69
KXG20755	Sorghum	cytosol	28.72	28.3
OQU84545	Sorghum	cytosol, endoplasmic reticulum	27.22	27.76
OQU83246	Sorghum	endoplasmic reticulum	24.33	27.38
KXG28194	Sorghum	endoplasmic reticulum	27.33	26.87
OQU83240	Sorghum	cytosol, extracellular	28.83	26.77

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8066296	UniProt:C5YPC5
ProteinID:EES17133.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf
InterPro:NB-ARC	ProteinID:OQU79229.1	ProteinID:OQU79230.1	ProteinID:OQU79231.1	ProteinID:OQU79232.1	ProteinID:OQU79233.1
ProteinID:OQU79234.1	ProteinID:OQU79235.1	EnsemblPlants:OQU79236	ProteinID:OQU79236	ProteinID:OQU79236.1	ProteinID:OQU79237.1
ProteinID:OQU79238.1	ProteinID:OQU79239.1	ProteinID:OQU79240.1	ProteinID:OQU79241.1	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3008G117000	SUPFAM:SSF52058
SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0001A885BE	InterPro:WH-like_DNA-bd_sf	RefSeq:XP_002443295.1	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:52701740..52711594

Molecular Weight (calculated)

106156.0 Da

IEP (calculated)

7.418

GRAVY (calculated)

-0.138

Length

933 amino acids

Sequence
(BLAST)

001: MAEAVVGVLI AKLGAALANQ ATAYGASLLL CNETSALKAL FGEIHKSKEE LESMKAYLHE SERFKDTDEI TGIFINKIRE LSFKIEDVVD EFMYKLEDDN
101: HGGFAAKMTK RIKHLKVWHR LAHKLYDINA QLKDAAERRA RYVIPGMQGN AGSSDNHGRS TNQNLCFARE EDVVGIEDKA TKLKHWLVGD LEEKNYKIAT
201: VWGMGGVGKT TLVDHVYKTV KLEFDAAAWV TVSKSYQVED LLKRIAREFG IVTDVTNMEI RNLVEIIRKH LEGKRFILVL DDVWEKDVWI NNIMEVFPTN
301: CTSRFVFTSR KFEVASLATG NCAIKLEPLG EKHSWKLFCK AAFRNSDDKW CPSELHDLAT KFLQKCEGLP IAIACIGRLL SSKDLTYAAW DSVYRELEFQ
401: PTNNVIRGVD IILKVSLEDL PYELKNCFLY CAIFPEDQEL TRRTLMRHWI TSGFIKEKDN RTLEQVAEEY LNDLVNRSLL QVVIKNASGR VKRCRMHDVI
501: RHLAIEKAAK ECFGIIYEGY GNFSVHGTRR LSIQRTNNVP LNQYSATYLR AIYGFTSSVN IDLVRPILAS SILLSTLDLQ GTRIKMLPND VFKLFNLRFL
601: GLRDTRIEIL PEDIGRLQNL EVLDAAHTCL LYLPKGVAKL IKLRHLYATV KITERCLFFG YAGVKMPKGI RNLTGLHVLQ TVKATPEILC DVAALTELRK
701: FAVDNVTSEH SVDLRNAVLN MSNLVSLIIH MSNENEVLPL EGLHLPETLS KLSLDGKLEK KQMPQILSSW LHLNNLTKMS LKSSKLDENS FRTLMVLCNL
801: RKLALFKAYD GNKLCFCAQT FPRLTELHIM GAPQLNQVKI EEDALGNLVE LSFSVCPELK CLPHGIEYLE ALDELYLEDV ADELIEIFRQ EGEANECKEE
901: LLKITNIREV IVTSTDKDFW RRIVSRKGNE LAN

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.