Factsheet for TraesCS1D01G016400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G014700.1	Wheat	peroxisome	69.18	60.25
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	75.29	44.57
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	76.71	35.13
TraesCS1D01G017600.1	Wheat	cytosol	75.76	34.89
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.76	34.81
TraesCS3D01G001100.1	Wheat	cytosol	49.18	29.86
TraesCS7D01G041000.1	Wheat	plastid	23.53	28.82
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	23.29	27.89
TraesCS7D01G040100.1	Wheat	cytosol	24.94	27.68
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	57.88	25.62
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.59	24.87
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.65	24.44
EES08155	Sorghum	cytosol	51.76	24.12
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	50.59	23.37
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.18	22.57
TraesCS1D01G017400.1	Wheat	cytosol	27.06	22.5
TraesCS3D01G001700.1	Wheat	cytosol	49.18	22.42
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	41.41	19.09
TraesCS1D01G018800.1	Wheat	cytosol	25.18	16.93
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.88	13.85
TraesCS2D01G504500.1	Wheat	cytosol	29.18	13.52
TraesCS7D01G040500.1	Wheat	cytosol	26.35	13.45
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	27.29	13.03
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.47	13.0
TraesCS7D01G416200.1	Wheat	extracellular	27.06	12.99
AT3G07040.1	Thale cress	cytosol	28.24	12.96
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	27.53	12.8
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	27.53	12.76
PGSC0003DMT400047578	Potato	plasma membrane	28.24	12.71
TraesCS3D01G440300.1	Wheat	cytosol	27.06	12.68
TraesCS7D01G436600.1	Wheat	cytosol	27.06	12.54
TraesCS7D01G140100.1	Wheat	cytosol	27.06	12.54
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	26.82	12.45
TraesCS5D01G422100.1	Wheat	cytosol	19.06	12.27
TraesCS2D01G064200.1	Wheat	cytosol	26.59	12.24
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	26.82	12.14
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	26.12	12.12
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	25.65	12.11
TraesCS4D01G088900.1	Wheat	cytosol	25.88	12.06
TraesCS3D01G440400.1	Wheat	cytosol	25.65	11.99
TraesCS1D01G454100.1	Wheat	cytosol	26.12	11.86
TraesCS3D01G310100.1	Wheat	cytosol	24.24	11.7
TraesCS7D01G040700.1	Wheat	cytosol	24.71	11.46
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	23.53	11.03
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	19.76	10.61
TraesCS1D01G064200.1	Wheat	plastid	18.12	9.99
TraesCS2D01G413600.1	Wheat	plastid	16.71	9.32
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	13.65	8.11
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	7.76	5.23
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	6.59	4.54
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	3.53	2.64
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	2.82	2.0
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	1.18	1.29
KRG98601	Soybean	cytosol	0.47	0.53
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	0.0	0.0
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G016400.1	EnsemblPlantsGene:TraesCS1D01G016400	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24
PFAM:PF13855	SUPFAM:SSF52058	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1D:-:7467148..7468425

Molecular Weight (calculated)

48150.9 Da

IEP (calculated)

9.024

GRAVY (calculated)

-0.009

Length

425 amino acids

Sequence
(BLAST)

001: MHEVIRLLAL NKAKEECFGK VYNGSATGAF SVEGVRRISV QGENLEQLSR SGATHLRALH VFGRYIDIDF LKPILTASNL LSTLDLKGTR IRMLPNEVFD
101: LFNLRYLGLR HTEIESLPEA VVRLQNLEVL DAFGTKLTYL PNNVVKLQKS RHLYAWTSGI SVGGVKVPNG MQHLVGLWAL QGVNATPEFL REVRVLTELR
201: TFGVCKVRSQ HSADLSNAIT KMSHLVHLKI LAAAENEVLR FEGLYLPPTL SWLCLGGQLG KTFMPELFSS WSHLNSLTRL TLAFSNIDEE TFSCLRVLCG
301: LRFLELIKAF EGKRLHFTAG SFPKFRYLFI WVAAQLNQVQ IEEGAMQNLV ELSFTECPEL NFLPNGIEHL AALEKLIVKD TSEELIEKLR QKRDSDECTK
401: HVMKISHIRN VTVGLRQKGL WERIR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.