Factsheet for TraesCS1D01G026000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	94.46	96.73
TraesCS1D01G017400.1	Wheat	cytosol	45.69	83.95
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	77.85	79.8
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	77.1	79.21
HORVU3Hr1G014890.2	Barley	cytosol	87.01	77.66
TraesCS1D01G454100.1	Wheat	cytosol	68.37	68.59
Os11t0229300-00	Rice	cytosol	45.26	65.28
Os11t0227700-01	Rice	cytosol	44.83	65.07
TraesCS4D01G088900.1	Wheat	cytosol	58.79	60.53
TraesCS3D01G440300.1	Wheat	cytosol	57.72	59.76
EES09609	Sorghum	cytosol	56.34	58.32
TraesCS3D01G440400.1	Wheat	cytosol	56.23	58.09
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	55.06	57.44
TraesCS7D01G140100.1	Wheat	cytosol	35.68	36.53
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	35.36	36.24
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	34.93	35.77
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.93	35.77
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	30.03	35.61
TraesCS1D01G018800.1	Wheat	cytosol	23.86	35.44
TraesCS7D01G040500.1	Wheat	cytosol	31.2	35.17
TraesCS7D01G436600.1	Wheat	cytosol	34.29	35.11
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	33.23	35.06
TraesCS2D01G504500.1	Wheat	cytosol	34.19	35.01
TraesCS2D01G064200.1	Wheat	cytosol	34.4	34.99
TraesCS7D01G040700.1	Wheat	cytosol	33.65	34.5
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	15.12	34.47
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	26.09	34.27
TraesCS7D01G040100.1	Wheat	cytosol	13.84	33.94
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	22.68	33.76
TraesCS7D01G041000.1	Wheat	plastid	12.46	33.72
TraesCS5D01G422100.1	Wheat	cytosol	23.64	33.64
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	20.23	33.45
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	21.62	32.9
TraesCS3D01G001100.1	Wheat	cytosol	24.39	32.71
TraesCS7D01G416200.1	Wheat	extracellular	30.46	32.32
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	20.34	31.89
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	12.03	31.83
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	30.56	31.13
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	30.46	31.09
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	29.82	30.87
TraesCS2D01G413600.1	Wheat	plastid	25.03	30.84
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	30.35	30.71
TraesCS1D01G014700.1	Wheat	peroxisome	15.76	30.33
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	10.33	30.03
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.5	29.95
TraesCS1D01G064200.1	Wheat	plastid	24.39	29.7
TraesCS1D01G017600.1	Wheat	cytosol	28.97	29.47
TraesCS3D01G001700.1	Wheat	cytosol	29.18	29.4
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.22	28.46
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.61	28.02
AT3G07040.1	Thale cress	cytosol	27.48	27.86
PGSC0003DMT400047578	Potato	plasma membrane	28.01	27.86
TraesCS1D01G016400.1	Wheat	cytosol	12.14	26.82
TraesCS3D01G310100.1	Wheat	cytosol	25.13	26.82

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1D01G026000	EnsemblPlants:TraesCS1D01G026000.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1D:-:10660610..10663429

Molecular Weight (calculated)

105770.0 Da

IEP (calculated)

7.518

GRAVY (calculated)

-0.149

Length

939 amino acids

Sequence
(BLAST)

001: MPHFVQAETD INCSVLVFFQ KRMAEAILLA VSKIGAIVLN EAVLAVIDKL SRKVDNLKEL PAKIKRIDIE LKTMNDVIQD LGTTHLSNNV VKGWIGNVRR
101: LAYHVEDVID KYSYEALKLK DEGFLNRYAF RSSRHIKVFS KIAEEVIEIE GEIRHIKELH IYWSTIVQPI RNEHAEIDRQ RWGGCFPESV SDEDLVGIDE
201: NRSKLTEWLT TSEKETTVVT VSGMGGLGKT TLVKNVYDRE KANFPDAHAW IVVSWVYAVV DLLKALLTKI QYTQESPPPS PLSPGAKADV YELTEAIKKI
301: LQNKKCLIVL DDVWDKEAYT QMCSAFQGLQ GSRVMITTRK EDVAALAPVR RRLLLQPLGS VESFKLFCSR AFHNSLGRKC PPELEAVAAA IVDRCRGLPL
401: AIVSSGSLLS TKQPTEHAWN QVYNHLRSEL RGNNHVQAIL NLSYHDLPGD LRNCFLYCSL FREDYEMSRE NLVRLWVAEG FAKKKDNSTP EEVAEGNLME
501: LIGRNMLEVV ERDELFRVST CKMHDIVRDL ALAVAKEERF GSASDQGEMT LMDKEVRRFS TCGWRDSMAA APGVDFPRLR TVISLSAALS STNMISSVLS
601: GSNYLTVLEL QDSAICHVPA SIGNLFNLRY IGLRRTRVQS LPDTIEKLSN LETLDVKQTK IEKLPPGIVK VEKLRHLLAD RYADEKQTKF QYFVGVEAPN
701: MVSNFRELQT LETVHASKDL SLQLKKMNKL QTVWVDNIDA SNCDDLFKTL SDMPLLSSLL LCACDEKETL TFQALKPISK RLHRLIIRGG WADGTLKCPI
801: FQGHGKNIKY LALSSCNLGN EDPLQLLASH LSALTYLSLN RVSSAGTLVL SAGCFCQLKT LVLRRMPNVK QLEIEEGAIP CIDGIYIVSL SELSMVPRGI
901: ESVGSLKKLW MLDLHKDFKA DWDLNQMHNK MTHVPELRA

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.