Factsheet for TraesCS3D01G310100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G321200.1	Wheat	cytosol	96.7	96.7
TraesCS3B01G344500.1	Wheat	cytosol	96.59	96.59
KXG33491	Sorghum	cytosol	66.14	69.87
GSMUA_Achr6P29800_001	Banana	cytosol	49.66	49.83
TraesCS1D01G018800.1	Wheat	cytosol	21.7	30.22
TraesCS7D01G040500.1	Wheat	cytosol	28.52	30.13
TraesCS3D01G001100.1	Wheat	cytosol	23.86	30.0
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	29.89	29.55
TraesCS7D01G140100.1	Wheat	cytosol	30.68	29.44
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	30.68	29.44
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	18.98	29.4
TraesCS7D01G041000.1	Wheat	plastid	11.59	29.39
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	30.57	29.37
TraesCS7D01G416200.1	Wheat	extracellular	29.2	29.04
TraesCS5D01G422100.1	Wheat	cytosol	21.7	28.94
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.11	28.9
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	30.11	28.8
TraesCS7D01G436600.1	Wheat	cytosol	30.0	28.79
TraesCS2D01G504500.1	Wheat	cytosol	30.0	28.79
TraesCS1D01G014700.1	Wheat	peroxisome	15.91	28.69
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	30.0	28.63
TraesCS2D01G064200.1	Wheat	cytosol	29.89	28.49
TraesCS2D01G413600.1	Wheat	plastid	24.66	28.48
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	11.48	28.45
TraesCS7D01G040700.1	Wheat	cytosol	29.2	28.06
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	22.61	27.83
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	25.0	27.78
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	12.84	27.43
TraesCS1D01G017400.1	Wheat	cytosol	15.91	27.4
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	28.18	27.34
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	27.84	27.22
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	28.64	27.16
TraesCS3D01G440300.1	Wheat	cytosol	27.95	27.12
TraesCS1D01G064200.1	Wheat	plastid	23.75	27.11
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	19.43	27.1
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	18.98	27.07
TraesCS3D01G001700.1	Wheat	cytosol	28.64	27.04
TraesCS1D01G017600.1	Wheat	cytosol	28.3	26.98
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.3	26.92
TraesCS7D01G040100.1	Wheat	cytosol	11.7	26.89
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	27.84	26.81
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	17.95	26.38
TraesCS4D01G088900.1	Wheat	cytosol	27.16	26.21
TraesCS3D01G440400.1	Wheat	cytosol	26.93	26.07
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	26.48	25.44
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.14	25.19
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	26.82	25.13
TraesCS1D01G454100.1	Wheat	cytosol	26.59	25.0
TraesCS1D01G016400.1	Wheat	cytosol	11.7	24.24
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	8.64	23.53

Protein Annotations

EnsemblPlants:TraesCS3D01G310100.1	EnsemblPlantsGene:TraesCS3D01G310100	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF16	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:424344384..424347381

Molecular Weight (calculated)

98824.2 Da

IEP (calculated)

8.572

GRAVY (calculated)

-0.057

Length

880 amino acids

Sequence
(BLAST)

001: MAEPVLASLI HVLGSLLSSR ATDHGRRLWS VSRDVGWLRD ELHSMQLFLH EMEVCSIEGG VAREAWIDQM RDIMSDSEDA IDIFDASQVQ GCCVLGKLRS
101: RHDVGARIRR IRAQLSDISR RRLEYAVERP RESSDKWIHG LLASSPMVHD IDVVGLDKYL DVLLRHILDG GLESELSVIS LVGMGGVGKT TLAKKAYTNP
201: DVKKHFECCA WIYVSKTMEL RSILCEMVKG LMRIPSAEAS SLCEKRLQEL LLSGLGCKKF LLVFDDVWDR GLWDIIKLVL PRNCSGSRVL VTTRNAAVAG
301: SVEGAKSTVQ QLQPLPFEDS WNLFCKKAFL QDGICPDAVK ETAEDIVKKC VGLPLAIVAA GSMMSGKEQT DTEWKSVLAS IQKDLSNGQM GIQQTLLSSY
401: RDLPHPLKPC FMLLSVIPYK SQISRKKLVR LWIAEGFVKE KADETLEITA EKYLAELINK SMVEVATASI SGRVKACRVH DLLHDLAIWL SENEKFSIIC
501: ADKGPSVSDR RVSLQMPHVS FSNERKKRLR SVFMFNNSAP TAIKCNVISR SFGLVRILDF EDGNMLELPK EIGGLVHLRY LGLRGTKLKK LPRTMNKLYH
601: LQTLDIRKTQ IKRITFQIKC LRNLRHLEMK QDDQCIQIPI GFNQLDKLQI LTGLQASTAV VREIASLTQL KKLSIEDLKN EDAKELCSSV NNMKELSYLS
701: IFPSDGTRPL DLAMLEPSSC LQKLNLAGSL QTLPNWFAQL DNLTKLRLSF SQLEDDPLSV LVRLPNLMFL QLNNAYKGKV MRCCRSGFLK LKIFIITELE
801: ELERWDVVDG AMPCVQEVWI MSCAKLAAIP AGFQSLATLQ RLRLVGMPSS FLGKLGDGGD DFIRVRHIPS IQTIQQFGQP

Best Arabidopsis Sequence Match ( AT5G43470.3 )
(BLAST)

001: MAEAFVSFGL EKLWDLLSRE SERLQGIDGQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLSGKGKG VKKHVRRLAC
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ

Arabidopsis Description

RPP8Disease resistance protein RPP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.