Factsheet for TraesCS1D01G018700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, vacuole
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G041000.1	Wheat	plastid	56.06	57.35
TraesCS7D01G040100.1	Wheat	cytosol	56.34	52.22
HORVU1Hr1G002730.1	Barley	cytosol	61.41	39.28
TraesCS1D01G018800.1	Wheat	cytosol	61.13	34.34
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	69.01	26.92
Os11t0678400-00	Rice	cytosol, mitochondrion, nucleus, peroxisome	51.55	25.42
TraesCS7D01G040500.1	Wheat	cytosol	57.46	24.49
HORVU1Hr1G002640.1	Barley	plasma membrane	63.1	23.96
TraesCS7D01G140100.1	Wheat	cytosol	61.41	23.77
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	59.15	23.6
TraesCS7D01G436600.1	Wheat	cytosol	60.56	23.45
TraesCS1D01G016400.1	Wheat	cytosol	27.89	23.29
TraesCS7D01G040700.1	Wheat	cytosol	60.0	23.25
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	60.0	23.23
TraesCS5D01G422100.1	Wheat	cytosol	41.97	22.58
TraesCS2D01G504500.1	Wheat	cytosol	58.31	22.57
TraesCS1D01G017400.1	Wheat	cytosol	32.11	22.31
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	57.46	22.27
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	54.08	20.94
Os10t0358200-00	Rice	plastid	53.8	20.47
TraesCS1D01G014700.1	Wheat	peroxisome	27.89	20.29
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	44.23	19.82
TraesCS2D01G064200.1	Wheat	cytosol	48.45	18.63
TraesCS7D01G416200.1	Wheat	extracellular	36.9	14.8
TraesCS3D01G440300.1	Wheat	cytosol	36.9	14.44
TraesCS3D01G001100.1	Wheat	cytosol	28.45	14.43
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	33.8	13.33
TraesCS3D01G440400.1	Wheat	cytosol	33.8	13.2
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	33.52	13.12
TraesCS4D01G088900.1	Wheat	cytosol	33.24	12.94
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	32.96	12.8
TraesCS1D01G454100.1	Wheat	cytosol	33.24	12.61
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	32.11	12.45
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	31.83	12.03
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	30.42	11.71
TraesCS3D01G310100.1	Wheat	cytosol	28.45	11.48
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.58	11.28
TraesCS1D01G017600.1	Wheat	cytosol	29.01	11.16
TraesCS3D01G001700.1	Wheat	cytosol	29.3	11.16
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.45	10.92
AT3G07040.1	Thale cress	cytosol	28.45	10.91
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	28.17	10.87
PGSC0003DMT400047578	Potato	plasma membrane	28.73	10.81
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	27.89	10.67
TraesCS1D01G064200.1	Wheat	plastid	22.54	10.38
TraesCS2D01G413600.1	Wheat	plastid	20.28	9.45
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	18.03	8.95
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	10.99	6.18
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	5.63	3.24
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	2.54	2.31
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	0.85	0.53
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	0.28	0.17
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	0.0	0.0
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G018700.1	EnsemblPlantsGene:TraesCS1D01G018700	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43886
PANTHER:PTHR43886:SF5	SEG:seg	SUPFAM:SSF52058	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:-:8182883..8184050

Molecular Weight (calculated)

40460.1 Da

IEP (calculated)

7.811

GRAVY (calculated)

0.079

Length

355 amino acids

Sequence
(BLAST)

001: MTALDDTMPS FTLLPLLCEK SRYMTVLELS GLPIVKIPYA IGDLFNLRHL GLRNSKVKML PNSVEKLLNL LTLDLSRSEI RELPSGIVKL KKLRHLFSQK
101: WSDQSHRALQ ACSGVLISKG LGNLTNLQTL QALQAEDDSV RQLGELRQMR SLRLLNVKRI YCERLCESLI QMQFLSYLEV TASDENEVLR LNALPPNLQK
201: LHLRGKLDEQ TIHETLVFKA AGGNLYALRL NWSGLIQDPL SSFSRLTNLT ELFLINAYNG EQLVFRMGWF PNLKTLLLKD LPHLKRIEIE EGAMATLEKL
301: HLVNLNSMTE VPLDIKFLET LQHLFFVELV VCASFGILSE LDLCFLIRTM CMSPE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.