Factsheet for TraesCS2D01G016400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	69.66	50.53
HORVU0Hr1G001780.1	Barley	endoplasmic reticulum	88.11	50.49
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	72.33	49.75
TraesCSU01G007900.1	Wheat	endoplasmic reticulum	96.12	42.86
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	63.59	41.52
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	71.6	37.25
TraesCS7D01G040700.1	Wheat	cytosol	76.7	34.5
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	32.52	34.45
TraesCS7D01G140100.1	Wheat	cytosol	75.97	34.13
TraesCS7D01G436600.1	Wheat	cytosol	74.76	33.59
TraesCS2D01G504500.1	Wheat	cytosol	74.51	33.48
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	72.09	33.37
TraesCS5D01G422100.1	Wheat	cytosol	52.91	33.03
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	72.82	32.75
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	72.09	32.39
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	23.54	30.03
TraesCS7D01G040500.1	Wheat	cytosol	57.77	28.57
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	59.47	26.72
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	35.68	23.82
TraesCS2D01G064200.1	Wheat	cytosol	51.94	23.19
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	36.89	21.26
TraesCS7D01G416200.1	Wheat	extracellular	36.89	17.18
TraesCS2D01G413600.1	Wheat	plastid	31.31	16.93
TraesCS3D01G440300.1	Wheat	cytosol	36.89	16.76
TraesCS1D01G064200.1	Wheat	plastid	30.83	16.47
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	35.44	16.22
TraesCS3D01G440400.1	Wheat	cytosol	35.44	16.06
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	35.19	15.83
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	34.95	15.75
TraesCS4D01G088900.1	Wheat	cytosol	34.47	15.57
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	34.47	15.12
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	33.25	15.1
TraesCS1D01G454100.1	Wheat	cytosol	33.5	14.74
TraesCS3D01G001700.1	Wheat	cytosol	31.8	14.06
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	31.31	13.99
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	31.07	13.91
TraesCS3D01G310100.1	Wheat	cytosol	27.43	12.84
PGSC0003DMT400047578	Potato	plasma membrane	29.37	12.82
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.64	12.76
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	28.64	12.72
TraesCS1D01G017600.1	Wheat	cytosol	28.4	12.68
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.64	12.67
AT3G07040.1	Thale cress	cytosol	28.16	12.53
TraesCS1D01G018800.1	Wheat	cytosol	18.45	12.03
TraesCS3D01G001100.1	Wheat	cytosol	17.72	10.43
TraesCS1D01G017400.1	Wheat	cytosol	0.49	0.39
TraesCS7D01G041000.1	Wheat	plastid	0.0	0.0
TraesCS7D01G040100.1	Wheat	cytosol	0.0	0.0
TraesCS2B01G007600.1	Wheat	mitochondrion	0.0	0.0
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	0.0	0.0
TraesCS1D01G016400.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G014700.1	Wheat	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2D01G016400.1	EnsemblPlantsGene:TraesCS2D01G016400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil
PANTHER:PTHR43886	PANTHER:PTHR43886:SF5	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:+:7970131..7972905

Molecular Weight (calculated)

46924.5 Da

IEP (calculated)

6.153

GRAVY (calculated)

-0.339

Length

412 amino acids

Sequence
(BLAST)

001: MAEIVLLLVI EKIGVALANG AAHQAGTQFS RYATRLIELQ GSMGRVVREL RIIHDVLFQM DIRNRHNQVY EGWLDEVRKV AHGMEDMVDE YMYQVGREHD
101: TGCCFYLKKG LRKPRSLLSL NQISSKVKEI EKDLAHLSEM KKQWVPMINN EDTSSLNYMI KKSQDLANIS RSLDDEDLVG VDENRGKLEQ WLGSDDVECS
201: LITLTGMGGL GKTALASNVY RKEREKFQCH AWVSISQTYS REDVLRNIIK ELFKDTTSGP SNIAAMDITS LQETLKRYLG EMKYLIILDD VWTPDAFEDL
301: SRSLVCNGKG SRLIITTRQG DVAALASQGH ILTLEPLPED KAWDLFCKKS FPKETNHHCP EELRLLSEEI LSKCKGLPLA IVSIGSLLHV REKTVEEWKR
401: INDQLSWEIL NN

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.