Factsheet for TraesCS5D01G422100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G416800.1	Wheat	cytosol	90.15	71.34
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	92.58	66.63
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	72.58	60.48
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	75.61	56.07
TraesCS7D01G140100.1	Wheat	cytosol	77.12	55.51
TraesCS7D01G436600.1	Wheat	cytosol	76.82	55.29
TraesCS7D01G040500.1	Wheat	cytosol	68.79	54.5
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	46.82	54.4
TraesCS7D01G040700.1	Wheat	cytosol	75.0	54.04
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	74.39	53.54
TraesCS2D01G504500.1	Wheat	cytosol	73.79	53.11
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	33.03	52.91
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	72.58	52.29
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	49.85	52.14
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	46.82	51.59
TraesCS7D01G041000.1	Wheat	plastid	23.79	45.24
TraesCS7D01G040100.1	Wheat	cytosol	25.15	43.34
TraesCS1D01G018800.1	Wheat	cytosol	41.06	42.88
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	59.09	42.53
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	22.58	41.97
TraesCS2D01G064200.1	Wheat	cytosol	50.45	36.08
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	33.18	30.63
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	17.58	29.82
TraesCS2D01G413600.1	Wheat	plastid	32.42	28.08
TraesCS3D01G440300.1	Wheat	cytosol	37.58	27.34
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	25.45	27.23
TraesCS1D01G064200.1	Wheat	plastid	31.52	26.98
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	35.91	26.33
TraesCS3D01G440400.1	Wheat	cytosol	36.21	26.29
TraesCS7D01G416200.1	Wheat	extracellular	34.55	25.76
TraesCS4D01G088900.1	Wheat	cytosol	35.3	25.55
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	34.55	24.95
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	33.79	24.34
TraesCS1D01G017400.1	Wheat	cytosol	18.64	24.07
TraesCS1D01G014700.1	Wheat	peroxisome	17.73	23.98
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	33.64	23.64
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	11.52	23.53
TraesCS3D01G001100.1	Wheat	cytosol	24.85	23.43
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	32.73	23.43
TraesCS1D01G454100.1	Wheat	cytosol	33.03	23.29
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	31.52	22.61
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	30.61	22.27
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	31.21	22.2
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.06	22.16
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.06	22.02
PGSC0003DMT400047578	Potato	plasma membrane	31.21	21.82
TraesCS1D01G017600.1	Wheat	cytosol	30.45	21.78
TraesCS3D01G310100.1	Wheat	cytosol	28.94	21.7
AT3G07040.1	Thale cress	cytosol	30.15	21.49
TraesCS3D01G001700.1	Wheat	cytosol	30.0	21.24
TraesCS1D01G016400.1	Wheat	cytosol	12.27	19.06

Protein Annotations

EnsemblPlants:TraesCS5D01G422100.1	EnsemblPlantsGene:TraesCS5D01G422100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PANTHER:PTHR43886	PANTHER:PTHR43886:SF5	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52058
SUPFAM:SSF52540	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:482142211..482144474

Molecular Weight (calculated)

75105.5 Da

IEP (calculated)

7.108

GRAVY (calculated)

-0.207

Length

660 amino acids

Sequence
(BLAST)

001: MMCSVTWIFE TEVQKVAHVM EDMVDEYLYL VGQEHDMGSC FYLKKGFRKS RSLLSMNQLA FKVKEIEKDL SHLSETNKRW VPMTISGATS SCDYIVKRGQ
101: DLANISRSLD EEDLVGVDEN REKLEQWLAD DDLERSVIAL LGMGGLGKTT LAANVYRNER NKFQCHAWVS ISQTYSREAV LRNICKELLK DDVSVLSKSA
201: AMDITCLEET LKSFLEQRKY LIIFDDVWTP ETFDDLSRML IHNDKGSRLI ITTREGDVAA LASPRHILTL EALPEDKAWD LFCKNIFPKE TNHDCHAELK
301: PLSRELVGSL FPEDYLLKRK QLVRLWIAEG FIEGRGGSTL EEVAEGYLKE LVDRNMLQLV EMNSFGRIKE FKMHDILREL AVDLCQKNCF GVTQEAKCEG
401: SLEMDGRRLI LDKINNDVQQ SFSGLHQLRS VITSGHGKSP FTLLPLLCKE SRYMTVLELS GIPIKKIPDA IGDLFNLRHL GLRNSKVKML PRSVEKLSNL
501: LTVDLCKSDI HELPSGIVKL KKLRHLFVEK IMDPDWRNIN HLSGMCIPNG LGNLTNLQTL QALQVQDESL RHLGELRQLK SLRLLNVKGI YCGRISESLV
601: QMRHLSLLSV NASDGNEVLL LNVLLPSLQK LRLRGRLAEA DRRPLAIPFS VVKLDASTFH

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.