Factsheet for TraesCS1D01G014800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, secretory
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G020900.1	Wheat	cytosol	62.23	47.97
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.02	39.31
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.42	28.43
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	81.11	28.23
TraesCS1D01G017600.1	Wheat	cytosol	79.57	27.84
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	30.03	23.54
KRG98601	Soybean	cytosol	26.32	22.49
TraesCS3D01G001700.1	Wheat	cytosol	60.99	21.14
EES08155	Sorghum	cytosol	59.13	20.94
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.2	20.15
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.89	20.04
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	23.84	19.79
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	56.04	19.67
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.04	19.55
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	47.99	16.81
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	29.41	16.73
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	48.3	16.25
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	28.79	15.53
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	27.86	14.59
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	27.24	13.95
TraesCS2D01G413600.1	Wheat	plastid	28.48	12.07
TraesCS5D01G422100.1	Wheat	cytosol	23.53	11.52
TraesCS1D01G064200.1	Wheat	plastid	26.93	11.28
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	24.77	11.19
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	31.27	11.01
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	26.63	10.86
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.27	10.85
TraesCS3D01G440300.1	Wheat	cytosol	30.34	10.8
TraesCS7D01G140100.1	Wheat	cytosol	30.65	10.8
TraesCS3D01G440400.1	Wheat	cytosol	30.34	10.78
PGSC0003DMT400047578	Potato	plasma membrane	30.96	10.59
TraesCS7D01G040700.1	Wheat	cytosol	30.03	10.59
AT3G07040.1	Thale cress	cytosol	30.34	10.58
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	28.79	10.45
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	29.41	10.37
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	28.79	10.33
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	30.03	10.33
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.1	10.25
TraesCS4D01G088900.1	Wheat	cytosol	28.48	10.09
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	28.48	10.07
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	28.48	10.04
TraesCS7D01G436600.1	Wheat	cytosol	27.86	9.81
TraesCS1D01G454100.1	Wheat	cytosol	28.17	9.72
TraesCS2D01G504500.1	Wheat	cytosol	27.24	9.6
TraesCS3D01G001100.1	Wheat	cytosol	20.74	9.57
TraesCS2D01G064200.1	Wheat	cytosol	26.32	9.21
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	25.7	9.15
TraesCS7D01G416200.1	Wheat	extracellular	24.46	8.93
TraesCS7D01G040500.1	Wheat	cytosol	22.91	8.88
TraesCS3D01G310100.1	Wheat	cytosol	23.53	8.64
TraesCS1D01G018800.1	Wheat	cytosol	6.5	3.32
TraesCS7D01G040100.1	Wheat	cytosol	0.0	0.0
TraesCS7D01G041000.1	Wheat	plastid	0.0	0.0
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	0.0	0.0
TraesCS1D01G014700.1	Wheat	peroxisome	0.0	0.0
TraesCS1D01G017400.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G016400.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G014800.1	EnsemblPlantsGene:TraesCS1D01G014800	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd00009	TIGR:cd14798
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:7067078..7068049

Molecular Weight (calculated)

35544.8 Da

IEP (calculated)

9.705

GRAVY (calculated)

-0.193

Length

323 amino acids

Sequence
(BLAST)

001: MAEAVVGPLV VTLGGALAKE AAVFGGALLG KEAAALRGLF GKIRDSKAEL ESMQAYLQEA ERFKDTNKTT AIFVGEIRGF AFQIEDVVDE FTYKLEDCKH
101: GGFAAKMKKK LKHIKTWRRL AAKLQEIDVK LKDAKRRKQD YAAVAGIGGS ASAARSTSRG QALHFTRDED LVGIEENKEK LIRWLTGSGG GDYLEQSNSK
201: VTTVWGMPGV GKTTLVAHVY NTVKLDFDAV AWVTVSESYN LEDLLKKIAA EFGIAGNIAN VEMRRLAESI NNNLQGKKYI LVLDDVWTPL VWSEIRNAFP
301: TSNCTGRFII TSRKHEVSLL ATR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.