Factsheet for TraesCS4D01G088900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G224100.1	Wheat	cytosol	98.14	98.14
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	98.46	96.15
HORVU4Hr1G015800.1	Barley	cytosol, endoplasmic reticulum	92.65	91.55
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	75.99	77.0
Zm00001d052987_P001	Maize	cytosol	69.08	72.92
EES08313	Sorghum	cytosol	69.96	71.93
TraesCS3D01G440400.1	Wheat	cytosol	69.08	69.31
TraesCS3D01G440300.1	Wheat	cytosol	67.43	67.81
TraesCS1D01G017400.1	Wheat	cytosol	37.83	67.51
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	60.53	58.79
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	58.55	58.42
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	58.44	58.19
TraesCS1D01G454100.1	Wheat	cytosol	53.95	52.56
TraesCS1D01G018800.1	Wheat	cytosol	25.88	37.34
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	31.91	36.74
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	36.73	36.53
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	28.62	36.5
TraesCS2D01G064200.1	Wheat	cytosol	36.73	36.29
TraesCS7D01G140100.1	Wheat	cytosol	36.29	36.1
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	36.18	36.03
TraesCS7D01G040500.1	Wheat	cytosol	32.89	36.01
TraesCS7D01G436600.1	Wheat	cytosol	35.86	35.66
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	24.12	35.66
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	34.76	35.62
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.53	35.33
TraesCS5D01G422100.1	Wheat	cytosol	25.55	35.3
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	21.6	34.68
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	15.57	34.47
TraesCS7D01G040700.1	Wheat	cytosol	34.54	34.39
TraesCS2D01G504500.1	Wheat	cytosol	34.54	34.35
TraesCS7D01G041000.1	Wheat	plastid	13.05	34.29
TraesCS7D01G040100.1	Wheat	cytosol	14.25	33.94
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	23.36	33.76
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	12.94	33.24
TraesCS7D01G416200.1	Wheat	extracellular	32.24	33.22
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	14.14	33.16
TraesCS3D01G001100.1	Wheat	cytosol	25.0	32.57
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	20.5	31.22
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	30.81	30.98
TraesCS2D01G413600.1	Wheat	plastid	25.88	30.97
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	30.92	30.65
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	30.7	30.37
TraesCS1D01G014700.1	Wheat	peroxisome	16.01	29.92
TraesCS1D01G064200.1	Wheat	plastid	25.11	29.7
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	29.93	29.42
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.82	29.22
TraesCS3D01G001700.1	Wheat	cytosol	29.82	29.18
TraesCS1D01G017600.1	Wheat	cytosol	29.5	29.14
PGSC0003DMT400047578	Potato	plasma membrane	29.71	28.71
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.06	28.65
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	10.09	28.48
AT3G07040.1	Thale cress	cytosol	28.84	28.4
TraesCS3D01G310100.1	Wheat	cytosol	26.21	27.16
TraesCS1D01G016400.1	Wheat	cytosol	12.06	25.88

Protein Annotations

EnsemblPlants:TraesCS4D01G088900.1	EnsemblPlantsGene:TraesCS4D01G088900	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:+:64536176..64541069

Molecular Weight (calculated)

104419.0 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.201

Length

912 amino acids

Sequence
(BLAST)

001: MAEAVLIVVT KIGDILLEEA TKGIIAKLSE KVTNLKELPV KVEEIKKQLT MMGNVIRQIG TVYLTDDVVK SWIGDVRRVA YHVEDVMDKY SYNLLQLQEE
101: GFLKRFFIKG THYVRVFSEI TDEIVEVEKE IQLVIKMKEQ WLQPSQLAAN PLTEMERQRS QDSFPEFVKD GDLVGIENNR IWLTSLLYSE EPESENTVIT
201: VSGMGGLGKS TLVSNVYERE KINFPAHAWI VVSQVYTVDA LLRKLLWKIG YTEQPLSAGI DKMDVHDLKK EIQERLQNRK YLIVLDDVWE QDVYFQIHDA
301: LQDLPGSRII ITTRKDHVAG ISSPNRHLEL EPLSKSDAFD LFCRRAFYNR KGHMCPKDLE MIATSIVDRC HGLPLAIVTI GGMLSSRQRL DIWTQKYNQL
401: RSELSNNDHV RAIFNLSYHD LPDDLKNCFL YCSLFPEDYH MSRESLVRLW VAEGFVVRKE KNTPEMVAEG NLMELIHRNM LEVVENDELG RVSTCKMHDI
501: VRELAISVAK EERFASADDY ATMILVQQDK DVRRLSLCGW KDDTAVKVKL PHLRTVLSLG PTSPCRGMLS SILSESNYLA VLELQDSEIT EVPTSIGSMF
601: NLRYIGLRRT KVRSLPDSIE NLSNLHTLDI KQTQIEKLPR GVVKIKKLRH LLADRYADEK QAEFRYFIGV QAPKELSNLE ELQTLETVES NPDLAEQLKK
701: LMQLRSVWID NISADDCANL FATLSTMPLL SSLLLSARDA KEALCFEALK PNSTYLHRLI TRGQWAKGTL NCPIFLKHGI NLKYLAISWC HVGEDPLGMM
801: APHMPNLTYL RLNNMHSAKT LVLSKDSFPN LKTLVLKHMH DVSELKIVDG ALPCIDGLYI VSLSKLNKVP QGIEFLRSLK KLWLLSLHKD FRTQWDTEGM
901: HPKMVHVPEL RV

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.