Factsheet for TraesCS4B01G091900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G088900.1	Wheat	cytosol	96.15	98.46
TraesCS4A01G224100.1	Wheat	cytosol	95.61	97.92
HORVU4Hr1G015800.1	Barley	cytosol, endoplasmic reticulum	90.9	91.98
TraesCS4B01G091600.1	Wheat	cytosol	61.56	88.46
TraesCS2B01G504900.1	Wheat	cytosol	74.3	77.11
Zm00001d052987_P001	Maize	cytosol	67.67	73.15
EES08313	Sorghum	cytosol	68.63	72.27
TraesCS3B01G483700.1	Wheat	cytosol	67.99	68.57
TraesCS3B01G483600.1	Wheat	cytosol	34.9	64.05
TraesCS1B01G032700.2	Wheat	mitochondrion	41.54	62.78
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	58.24	59.39
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	57.71	59.17
TraesCS1B01G377400.1	Wheat	cytosol	49.04	51.99
TraesCS1B01G030900.1	Wheat	cytosol	16.7	37.59
TraesCS7B01G345300.1	Wheat	mitochondrion	27.3	36.59
TraesCS6B01G030900.1	Wheat	cytosol	32.12	36.06
TraesCS5B01G301500.1	Wheat	plasma membrane	32.12	35.93
TraesCS5B01G416800.1	Wheat	cytosol	31.8	35.61
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	35.33	35.56
TraesCS2B01G007600.1	Wheat	mitochondrion	16.6	35.47
TraesCS2B01G058900.1	Wheat	cytosol	34.58	35.34
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	34.37	35.27
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	34.05	34.68
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.48	32.76
TraesCS1B01G022200.1	Wheat	cytosol	22.59	32.02
TraesCS7B01G323800.1	Wheat	extracellular	31.91	31.7
TraesCS7B01G324300.1	Wheat	extracellular	31.37	31.17
TraesCS3B01G040100.1	Wheat	cytosol	28.8	30.99
TraesCS2B01G225000.1	Wheat	cytosol	28.59	30.83
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	29.55	29.81
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	22.7	29.53
TraesCS6B01G161400.1	Wheat	cytosol	28.91	29.48
TraesCS1B01G020900.1	Wheat	cytosol	13.17	29.36
TraesCS2B01G435600.1	Wheat	cytosol, plastid	28.8	29.11
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.02	29.11
PGSC0003DMT400047578	Potato	plasma membrane	28.91	28.6
AT3G07040.1	Thale cress	cytosol	28.16	28.4
TraesCS6B01G153000.1	Wheat	cytosol	28.48	27.94
TraesCS1B01G020300.1	Wheat	cytosol	28.16	27.48
TraesCS3B01G344500.1	Wheat	cytosol	25.48	27.05
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	27.3	26.93

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G091900	EnsemblPlants:TraesCS4B01G091900.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr4B:+:95069156..95071960

Molecular Weight (calculated)

106671.0 Da

IEP (calculated)

6.813

GRAVY (calculated)

-0.157

Length

934 amino acids

Sequence
(BLAST)

001: MHTAISIFIL PCNMLYLCCL DQMAEAVLIA VTKIGDILLE EATKGIIAKL SEKVTNLKEL PVKVEEIKKQ LTMMGNVIRQ IGTVYLTDDV VKSWIGDVRR
101: VAYHVEDVMD KYSYNLLQLQ EEGFLKRFFI KGTHYVRVFS EITDEIVEVE KEIQLVIKMK EQWLQPSQLV ANPLTEMERQ RSQDSFPEFV KDGDLVGIEY
201: NRIWLTSLLY SEEPEPENTV ITVSGMGGLG KSTLVSNVYE REKINFPAHA WIVVSQVYTV DALLRKLLWK IGYTEQPLSA GIDKMDVHDL KKEIQQRLQN
301: RKYLIVLDDV WEQDVYFQIH DALQDLPGSR IIITTRKDHV AGISSPNRHL ELEPLSKSDA FDLFCRRAFY NRKGHMCSKD LEMIATSIVD RCHGLPLAIV
401: TIGGMLSSRQ RLDIWTQKYN QLRSELSNND HVRAILNLSY HDLPDDLKNC FLYCSLFPED YHMSRESLVR LWVAEGFVVR KEKNTPEMVA EGNLMELIHR
501: NMLEVVENDE LGRVSTCKMH DIVRELAISV AKEERFASAD DYATMILVQQ DKDVRRLSLC GWKDDTAVKV KLPHLRTVLS LGATSPCRGM LSSILSESNY
601: LAVLELQDSE ITEVPTSIGS MFNLRYIGLR RTKVRSLPDS IENLSNLHTL DIKQTQIEKL PRGVVKIKKL RHLLADRYAD EKQAEFRYFI GVQAPKELSN
701: LEELQTLETV ESNPDLAEQL KKLMQLRSVW IDNISADDCA NLFATLSTMP LLSSLLLSAK DAKEALCFEA LKPNSTYLHR LITRGQWAKG TLNCPIFLKH
801: GINLKYLAIS WCHLGEDPLG MMAPHMPNLT YLRLNNMHSA KTLVLSKDSF PNLKTLVLKH MHDVSELKIV DGALPCIDGL YIVSLSKLNK VPQGIESLGS
901: LKKLWLLGLH KDFRTQWGTE GMHPKMVHVP ELRV

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.