Factsheet for TraesCS1B01G377400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G091600.1	Wheat	cytosol	38.48	52.15
TraesCS1B01G032700.2	Wheat	mitochondrion	36.1	51.46
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	51.99	49.04
TraesCS2B01G504900.1	Wheat	cytosol	49.26	48.22
TraesCS3B01G483700.1	Wheat	cytosol	50.62	48.16
TraesCS3B01G483600.1	Wheat	cytosol	27.7	47.94
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	48.58	46.98
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	48.47	46.62
TraesCS1B01G030900.1	Wheat	cytosol	17.25	36.63
TraesCS7B01G345300.1	Wheat	mitochondrion	27.81	35.15
TraesCS5B01G301500.1	Wheat	plasma membrane	31.9	33.65
TraesCS5B01G416800.1	Wheat	cytosol	31.33	33.09
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	34.85	33.08
TraesCS6B01G030900.1	Wheat	cytosol	31.21	33.05
TraesCS2B01G058900.1	Wheat	cytosol	34.28	33.04
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	33.83	32.5
TraesCS1B01G022200.1	Wheat	cytosol	24.06	32.17
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	32.92	31.87
TraesCS2B01G007600.1	Wheat	mitochondrion	15.78	31.81
TraesCS3B01G040100.1	Wheat	cytosol	31.21	31.68
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.93	31.51
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	25.31	31.06
TraesCS1B01G020900.1	Wheat	cytosol	14.53	30.55
TraesCS2B01G225000.1	Wheat	cytosol	29.51	30.02
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.44	29.91
TraesCS7B01G323800.1	Wheat	extracellular	31.78	29.79
TraesCS7B01G324300.1	Wheat	extracellular	31.78	29.79
TraesCS1B01G020300.1	Wheat	cytosol	30.87	28.42
TraesCS3B01G344500.1	Wheat	cytosol	27.47	27.5
TraesCS2B01G435600.1	Wheat	cytosol, plastid	28.83	27.49
TraesCS6B01G153000.1	Wheat	cytosol	29.06	26.89
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.15	26.64
TraesCS6B01G161400.1	Wheat	cytosol	27.58	26.53
PGSC0003DMT400047578	Potato	plasma membrane	28.38	26.48
AT3G07040.1	Thale cress	cytosol	27.47	26.13
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	27.92	25.98

Protein Annotations

EnsemblPlants:TraesCS1B01G377400.1	EnsemblPlantsGene:TraesCS1B01G377400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:-:609424255..609426969

Molecular Weight (calculated)

100114.0 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.241

Length

881 amino acids

Sequence
(BLAST)

001: MAESLLLALT KVSYYLAEQA GYKLTEEIRK LRDLPSKVGK IERELRMMNA VVRHIDTADT NELLKEWIVD VRKLAYRVED VMDNFTHHAL ELEGESFMMR
101: QAKKIYFSKL FSAMASDIIQ IDEDIQHVTA LRERYVHVDL TQQQMQAPQD ELLPQVRFPQ FVNDEDLVGM QPYKVPLTQW LQSAEPDGTV ITVCGMGGLG
201: KTTLVANVYE RAKSEFQAHA WIAVSKTYAP DALLRTLIRS VGEDKQEQLG NDKNIQDLRA VLNKKLKEHN TILVLDDVWD QRVFLDIQDA FKDLETSRVV
301: ITTRSDDVAS LANPARRLKL QPLESSDASE LFRKRAFAKN RDHKCPDHLK ELAENIVMRC QGLPLAIVSI GILLSSRKQI KPVWTQVYNQ LRYHLAKNDD
401: VRGIINLSYR DLPPELRNCF LYCSMFPQNW YLARRSLVLL WVAEGFAVRE DQSTAEEVAE GYLEELIRRN MLQLVETDEL GRVNTCKMHD IVRDLALSIA
501: RNVRFGATNN SSEAISTMDT EIVRRLSMSG DTYINQKKGL PHLRTLIAHG RSPASSPDAI WPVLLKSKFI TVLELQDSNI TLVPPSIGDL FNLRYIGLRG
601: TAIKMLPDSI EKLLNLQTLD VKSTGIERLP RGVAKVKNLR HLLADRSDDD KDLEFTCLGV AAPRALSNLE QLQTLETVEA SNDLAEQLEK LMRLESLWID
701: NISANQCAEL FAAVSRLPLL SSLSLAASGQ DEELSFEALQ PTSSKLQRLI VKGLWATATL DCPIFKDHGG NLKYLDMSWC NLGEDTLKEL SSYLQNLTHL
801: NLNRDMHDVV KLTIEAGAIP TIRALYLRSM PKLGIIPDGI ESLDSLKKLW MVGLHPEFSA RWKKKDEWRQ KVSKIPELRI I

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.