Factsheet for TraesCS1B01G030900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.8	38.07
TraesCS1B01G022200.1	Wheat	cytosol	57.59	36.27
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	61.69	35.65
TraesCS2B01G225000.1	Wheat	cytosol	61.45	29.45
TraesCS1B01G020900.1	Wheat	cytosol	28.92	28.64
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	63.37	28.4
TraesCS1B01G020300.1	Wheat	cytosol	62.65	27.17
TraesCS3B01G040100.1	Wheat	cytosol	51.08	24.42
TraesCS1B01G032700.2	Wheat	mitochondrion	34.94	23.46
TraesCS4B01G091600.1	Wheat	cytosol	36.14	23.08
TraesCS7B01G345300.1	Wheat	mitochondrion	36.14	21.52
TraesCS3B01G483600.1	Wheat	cytosol	25.3	20.63
TraesCS6B01G030900.1	Wheat	cytosol	38.07	18.99
TraesCS5B01G301500.1	Wheat	plasma membrane	35.42	17.6
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	38.8	17.58
TraesCS7B01G323800.1	Wheat	extracellular	39.76	17.55
TraesCS7B01G324300.1	Wheat	extracellular	39.52	17.45
TraesCS6B01G161400.1	Wheat	cytosol	38.31	17.36
TraesCS2B01G058900.1	Wheat	cytosol	38.07	17.29
TraesCS1B01G377400.1	Wheat	cytosol	36.63	17.25
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	37.83	17.25
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	38.55	17.24
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	37.83	17.23
TraesCS5B01G416800.1	Wheat	cytosol	34.46	17.15
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	37.11	16.79
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	37.59	16.7
TraesCS2B01G504900.1	Wheat	cytosol	36.14	16.67
TraesCS2B01G435600.1	Wheat	cytosol, plastid	36.63	16.45
PGSC0003DMT400047578	Potato	plasma membrane	37.35	16.42
TraesCS6B01G153000.1	Wheat	cytosol	37.11	16.18
AT3G07040.1	Thale cress	cytosol	35.9	16.09
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	36.63	16.05
Solyc08g005440.2.1	Tomato	cytosol, extracellular	35.9	16.0
TraesCS3B01G483700.1	Wheat	cytosol	35.42	15.87
TraesCS3B01G344500.1	Wheat	cytosol	31.08	14.66
TraesCS2B01G007600.1	Wheat	mitochondrion	14.94	14.19

Protein Annotations

EnsemblPlants:TraesCS1B01G030900.1	EnsemblPlantsGene:TraesCS1B01G030900	Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:WH-like_DNA-bd_sf	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931
PRINTS:PR00364	SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:-:15236218..15238293

Molecular Weight (calculated)

47325.9 Da

IEP (calculated)

8.961

GRAVY (calculated)

-0.091

Length

415 amino acids

Sequence
(BLAST)

001: MGKRALTEVI YTYLQGKKYI LIMDDVWGVD VWFNIRDAFP KCSGNRFVIT SRIHEVALLA TGNRVLELKP LQAAESWQLF CKEAFWKDQN RTCPEGLKHL
101: AQKFVSKCSG LPIAIACIGR LLSCKQPTYS DWENVYKEIE LQLTNNVILD VNIILKVSLE DLPYDLKNCF LHCALFPEDY EIKRRRVMRQ WIAAGFVRAK
201: DNKTLEEVAE ECLTELVKRS LLQVVARNSG GRLKCCRMHD VIRLLALNKA REECFGKVYD GSGAFSVQGT RRISIQSENI EQLSQSCGTH FRALHVFETR
301: ISINLLKSIL SSSRLLSMLD LQGARIKMLP NQVFDLFNLR YLGLRHTGIQ NLPEAIGRLQ NLQVLDAYNT ELSSLPNSVV KLHKLRYFYA CTGGLEFDQC
401: AGVKVPNGMR HLTSL

Best Arabidopsis Sequence Match ( AT1G10920.1 )
(BLAST)

001: MKSLGIQEII DGASSMSLQE RQREQKEIRQ TFANSSESDL VGVEQSVEAL AGHLVENDNI QVVSISGMGG IGKTTLARQV FHHDMVQRHF DGFAWVFVSQ
101: QFTQKHVWQR IWQELQPQNG DISHMDEHIL QGKLFKLLET GRYLVVLDDV WKEEDWDRIK AVFPRKRGWK MLLTSRNEGV GIHADPKSFG FKTRILTPEE
201: SWKLCEKIVF HRRDETGTLS EVRVDEDMEA MGKEMVTCCG GLPLAVKVLG GLLATKHTVP EWKRVYDNIG PHLAGRSSLD DNLNSIYRVL SLSYENLPMC
301: LKHCFLYLAH FPEYYEIHVK RLFNYLAAEG IITSSDDGTT IQDKGEDYLE ELARRNMITI DKNYMFLRKK HCQMHDMMRE VCLSKAKEEN FLEIFKVSTA
401: TSAINARSLS KSRRLSVHGG NALPSLGQTI NKKVRSLLYF AFEDEFCILE STTPCFRSLP LLRVLDLSRV KFEGGKLPSS IGDLIHLRFL SLHRAWISHL
501: PSSLRNLKLL LYLNLGFNGM VHVPNVLKEM QELRYLQLPM SMHDKTKLEL SDLVNLESLM NFSTKYASVM DLLHMTKLRE LSLFITDGSS DTLSSSLGQL
601: RSLEVLHLYD RQEPRVAYHG GEIVLNCIHL KELELAIHMP RFPDQYLFHP HLSHIYLWCC SMEEDPIPIL ERLLHLKSVI LTFGAFVGRR MVCSKGGFPQ
701: LCFLKLEELE ELEEWIVEEG RCHFFVL

Arabidopsis Description

LOV1Putative inactive disease susceptibility protein LOV1 [Source:UniProtKB/Swiss-Prot;Acc:O04093]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.