Factsheet for TraesCS1B01G022200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.82	82.06
TraesCS1B01G020900.1	Wheat	cytosol	50.08	78.76
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	65.1	59.75
TraesCS1D01G017600.1	Wheat	cytosol	82.09	58.61
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	81.18	57.9
TraesCS1A01G018400.2	Wheat	cytosol	80.27	57.63
TraesCS1B01G030900.1	Wheat	cytosol	36.27	57.59
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	81.49	57.37
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	79.36	56.66
TraesCS1B01G020300.1	Wheat	cytosol	78.15	53.81
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	72.84	51.84
EES08155	Sorghum	cytosol	57.21	41.34
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.66	40.73
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.66	40.73
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.84	39.74
TraesCS2B01G225000.1	Wheat	cytosol	49.47	37.64
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	53.26	36.56
TraesCS3B01G040100.1	Wheat	cytosol	44.92	34.1
TraesCS3B01G483600.1	Wheat	cytosol	24.28	31.43
KRG98601	Soybean	cytosol	15.33	26.72
TraesCS5B01G301500.1	Wheat	plasma membrane	31.56	24.91
TraesCS1B01G377400.1	Wheat	cytosol	32.17	24.06
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	33.08	23.8
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	32.63	23.6
TraesCS6B01G030900.1	Wheat	cytosol	29.59	23.44
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	32.93	23.38
AT3G07040.1	Thale cress	cytosol	32.63	23.22
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	31.87	23.08
TraesCS5B01G416800.1	Wheat	cytosol	29.14	23.02
TraesCS3B01G483700.1	Wheat	cytosol	32.02	22.79
TraesCS2B01G504900.1	Wheat	cytosol	31.11	22.78
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	31.56	22.68
TraesCS2B01G058900.1	Wheat	cytosol	31.41	22.65
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	32.02	22.59
TraesCS6B01G161400.1	Wheat	cytosol	31.26	22.49
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.56	22.34
TraesCS2B01G435600.1	Wheat	cytosol, plastid	31.26	22.29
PGSC0003DMT400047578	Potato	plasma membrane	31.56	22.03
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	30.96	21.54
TraesCS7B01G323800.1	Wheat	extracellular	30.65	21.49
TraesCS6B01G153000.1	Wheat	cytosol	30.96	21.43
TraesCS1B01G032700.2	Wheat	mitochondrion	19.88	21.2
TraesCS7B01G324300.1	Wheat	extracellular	30.2	21.17
TraesCS7B01G345300.1	Wheat	mitochondrion	22.31	21.09
TraesCS4B01G091600.1	Wheat	cytosol	20.33	20.62
TraesCS3B01G344500.1	Wheat	cytosol	26.56	19.89
TraesCS2B01G007600.1	Wheat	mitochondrion	9.41	14.19

Protein Annotations

EnsemblPlants:TraesCS1B01G022200.1	EnsemblPlantsGene:TraesCS1B01G022200	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931
PRINTS:PR00364	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:+:10060092..10062157

Molecular Weight (calculated)

74479.9 Da

IEP (calculated)

8.465

GRAVY (calculated)

-0.257

Length

659 amino acids

Sequence
(BLAST)

001: MAEAVIGQLV VKLGGALAKE AATYGGALLC KEAAALRGLF GKIRQSKVEL ESMQAYLQEA ERFKDTDKTT AIFVSEIRRL AFHIEDVVDE FTYKLEDCKQ
101: GGFAGKMKKR LKHIKTWRRL AAKLQEIEAQ LQDANRRKKD YAVTGRSASA AGSTREGQAL HFTRDEDLVG IEENKERLIQ WMDGCGDGLE QSNNKVALVW
201: GMPGVGKTTL VDHVYNTVKE DFDVAAWITV SESYCTKDLL KKIAAQFSIT VDVANIEMRG LAKSIHNYLQ GKRYILVLDD VWAEGLWSEI RDVFPTSNCT
301: GRVVMTSRKQ TVLATRELAI HLEPLQAHHS WVLFCKSAFW NACDKKCPLE LQELARKFIA KCQGLPIAIA CIGRLLSCKP QNSTEWEDVY RCLDSQFAKD
401: VIPDAHLILK VSLEDFQYDM KNCFLHCALS PEDYVLKRRR TVRKWIAAGF ITNKEENRTL EEVAEGYLVE LVNRSLLQVV ERNYAGRLKE CRMHDVIHLL
501: ALNKAKEECF GKVYDSSTAT GSLSIEGARR ISVQGENHEH LSRSGATQLR ELQVFERSIN IDQLKPIITS SNLLTTLDLQ GTCIKILPNE VFDLFNLRYL
601: GLRHTEIESL PKAVRRLRNL EVLYAAHSKL TYLPKSVVKL QKLRIAGSSD HESHSRVSA

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.