Factsheet for TraesCS1A01G017800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G018400.2	Wheat	cytosol	81.41	83.01
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	81.52	82.67
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	80.98	82.03
TraesCS1B01G022200.1	Wheat	cytosol	57.37	81.49
TraesCS1A01G016200.1	Wheat	cytosol	75.85	74.58
EES08155	Sorghum	cytosol	54.38	55.81
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.27	54.45
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.27	54.45
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	52.24	53.74
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.46	53.02
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	51.39	52.86
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	53.85	52.5
TraesCS2A01G197500.1	Wheat	golgi, vacuole	51.39	50.9
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	44.66	45.34
TraesCS5A01G192100.1	Wheat	mitochondrion	43.16	42.84
TraesCS7A01G077800.1	Wheat	cytosol	41.13	42.08
TraesCS4A01G376200.1	Wheat	cytosol	41.67	39.96
TraesCS2A01G046700.1	Wheat	extracellular, plastid	24.47	31.63
TraesCS4A01G175700.1	Wheat	cytosol	29.06	31.45
TraesCS2A01G416600.1	Wheat	plastid	30.98	31.39
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	18.27	31.2
TraesCS7A01G045600.1	Wheat	cytosol	20.51	31.17
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	20.3	31.05
AT3G07040.1	Thale cress	cytosol	30.66	30.99
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	30.13	30.79
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.02	30.78
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	16.88	30.68
TraesCS7A01G044900.1	Wheat	cytosol	28.63	30.59
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	29.91	30.53
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	29.81	30.46
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.81	30.43
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	29.59	30.21
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	29.38	29.99
TraesCS4A01G224000.1	Wheat	cytosol	29.17	29.9
TraesCS2A01G503900.1	Wheat	plasma membrane	29.27	29.88
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.7	29.86
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	13.03	29.83
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	29.06	29.66
TraesCS3A01G447600.1	Wheat	cytosol	28.74	29.66
TraesCS7A01G044200.1	Wheat	cytosol	27.03	29.49
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	28.85	29.44
PGSC0003DMT400047578	Potato	plasma membrane	29.59	29.34
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	28.63	29.29
TraesCS4A01G224100.1	Wheat	cytosol	28.53	29.28
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	29.27	29.18
TraesCS7A01G423400.1	Wheat	extracellular	29.27	29.15
TraesCS7A01G046400.1	Wheat	cytosol	9.29	29.1
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	26.71	29.07
TraesCS7A01G045800.1	Wheat	extracellular	26.07	29.01
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	24.68	28.98
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	29.27	28.96
TraesCS7A01G045000.1	Wheat	cytosol	10.15	28.96
TraesCS2A01G093000.1	Wheat	cytosol	26.18	28.86
TraesCS4A01G444800.1	Wheat	mitochondrion	11.65	28.84
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	28.1	28.74
TraesCS7A01G045900.1	Wheat	cytosol	27.88	28.49
TraesCS4A01G444700.1	Wheat	cytosol	11.54	28.35
TraesCS3A01G321200.1	Wheat	cytosol	26.5	28.18
TraesCS4A01G224500.1	Wheat	cytosol	10.36	28.12
KRG98601	Soybean	cytosol	11.11	27.51
TraesCS7A01G046200.1	Wheat	cytosol	11.97	27.12
TraesCS2A01G480100.1	Wheat	cytosol	16.03	26.36
TraesCS4A01G393800.1	Wheat	cytosol	12.29	25.5

Protein Annotations

EnsemblPlants:TraesCS1A01G017800.1	EnsemblPlantsGene:TraesCS1A01G017800	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:+:9340861..9343934

Molecular Weight (calculated)

105526.0 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.098

Length

936 amino acids

Sequence
(BLAST)

001: MAEAVVGKLV VMLGAALAKE AVILGRALLG KEATALRGLF SNIRRSKAEL ESMQAYLQEA ERFKDTDQTT AIFVGEIRGL AFRIEDVVDE FIYKLEDCKH
101: GGFAGKMRKR LKHIKAWRCL AAKLQEIEAQ LQDANRRKRD YAVTGRSATA ARSTNQVQAL HFTRDEDLVG IEEHKERLIR WLTGSGDGPE QSSSKVTMVW
201: GMPGVGKTTL VDHVYNTMKE DFDVAAWVTV SESYRIEDLL KKIASQFSIT VDIANIEVRG LAKSIHNYLQ GKRYILVLDD VWDERLWSEI RDIFPTSNCI
301: GRVVMTSRKQ TVLATRESAY AIHLEPLQAH HSWVLFCKRA FWNDDDKKCP LELQELAWKF IAKCQGFPIA IACIGRLLSC KPQNSAEWED VYMCLDSQFA
401: KEVIPDAHLI LKVSLEDLPC DLKNCFLHCA LSPEDYVLKR RKTMRQWITA GFITEKDESK TLEEVAEGYL VELVNRSLLQ VVLRNYAGRL KHCRMHDVIR
501: LLALDKAKEE CFGKVYNFSG GTRAFSLEGA RRISVVLGNI EQLSLSGATQ LRALHVFEKY FNVDFLKPVL TTSNLMSTLD LQGTCIKILP NEIFDLFNLR
601: YLGLRDTEIE SLPEALGRLQ NLEVLDVMSS KLTYLPNSVV KLQKLRYLYA CTTTISETLT IGGVKVPNGM QHMAGLRSLQ SIKATPEFLH EVGALTELRT
701: FSICNVRSGH SADLSSAITK MSRLAHLEII AAAEDEVLRL EGVAAGDEVL RLEGLYLPPT LSRLGLAGQL EKTSMPHLFS SWSHLNSLTR LDLAFSNIDE
801: QTFSCLCQLH GLCSLLLWNA FEGKRLDFYA GSFPELRHLD ICGAAQLSQV GIEEGAMQNL VELWFGDCPD LRFLPDGIKH LAALEKLVLK DTSEELIEKL
901: RQERDSDECN DDLMKISHIR NVTVALMQKG LVERIR

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.