Factsheet for TraesCS5A01G192100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G057670.2	Barley	mitochondrion	92.89	91.06
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	45.71	46.75
TraesCS2A01G197500.1	Wheat	golgi, vacuole	44.64	44.55
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	42.84	44.4
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	42.42	43.96
TraesCS7A01G077800.1	Wheat	cytosol	42.1	43.39
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	42.84	43.16
TraesCS1A01G018400.2	Wheat	cytosol	41.89	43.03
TraesCS4A01G376200.1	Wheat	cytosol	43.37	41.91
TraesCS1A01G016200.1	Wheat	cytosol	42.1	41.7
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	17.39	31.84
TraesCS2A01G046700.1	Wheat	extracellular, plastid	24.39	31.77
TraesCS2A01G416600.1	Wheat	plastid	30.96	31.6
TraesCS7A01G045600.1	Wheat	cytosol	20.57	31.49
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	18.24	31.39
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.22	31.22
TraesCS7A01G045000.1	Wheat	cytosol	10.71	30.79
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	29.9	30.79
TraesCS4A01G175700.1	Wheat	cytosol	28.21	30.75
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	19.94	30.72
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.8	30.64
TraesCS3A01G447600.1	Wheat	cytosol	29.37	30.54
TraesCS4A01G224100.1	Wheat	cytosol	29.27	30.26
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	29.37	30.24
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	29.37	30.21
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	29.16	30.05
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	29.16	29.99
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	25.34	29.99
TraesCS4A01G224000.1	Wheat	cytosol	28.95	29.9
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	29.06	29.88
TraesCS7A01G044900.1	Wheat	cytosol	27.57	29.68
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	28.84	29.66
TraesCS2A01G503900.1	Wheat	plasma membrane	28.84	29.66
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	27.04	29.65
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.16	29.54
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	28.63	29.44
TraesCS7A01G044200.1	Wheat	cytosol	26.72	29.37
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	28.1	28.96
TraesCS4A01G444700.1	Wheat	cytosol	11.66	28.87
AT3G07040.1	Thale cress	cytosol	28.31	28.83
PGSC0003DMT400047578	Potato	plasma membrane	28.84	28.81
TraesCS7A01G045900.1	Wheat	cytosol	27.89	28.71
TraesCS7A01G423400.1	Wheat	extracellular	28.53	28.62
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	12.41	28.61
TraesCS3A01G321200.1	Wheat	cytosol	26.62	28.52
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	28.53	28.44
TraesCS2A01G093000.1	Wheat	cytosol	25.34	28.15
TraesCS7A01G046400.1	Wheat	cytosol	8.91	28.09
TraesCS7A01G045800.1	Wheat	extracellular	25.03	28.06
TraesCS7A01G046200.1	Wheat	cytosol	12.2	27.84
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	27.68	27.8
TraesCS4A01G444800.1	Wheat	mitochondrion	11.03	27.51
TraesCS2A01G480100.1	Wheat	cytosol	16.54	27.42
TraesCS4A01G224500.1	Wheat	cytosol	9.86	26.96
TraesCS4A01G393800.1	Wheat	cytosol	11.98	25.06

Protein Annotations

EnsemblPlants:TraesCS5A01G192100.1	EnsemblPlantsGene:TraesCS5A01G192100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF22	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr5A:-:395874465..395878171

Molecular Weight (calculated)

106839.0 Da

IEP (calculated)

7.814

GRAVY (calculated)

-0.126

Length

943 amino acids

Sequence
(BLAST)

001: MCQRRRAGSS DIRKQVPKNH LLLLGMAEGI VASLMVKLGV ALATQAATFG GSCIAHEVTA LRRLFSEMEE IKDELECMQT FLQVSERLRD HDETMATFVR
101: KVRTLSFGIE DVVDEFSCKF CDDHGGAASR AIRKLRRIRT WHRLAFRLVR IKASLKIAVE RVKMFNTEGI SKVQQPQAHD KKLGPSESAG LVTADCPVGI
201: EHNRDLLIGW LTDEIQQNMV ISVWGMGGVG KTTLVTHVYN IIKPRFERHA FITVSQHCRS VDLLRQILKK FCKKDHNVTL SEGIDSMDRE SLVEIMQSYL
301: HSRRYVLVLD DLWDANVWFE IRDAFAGGDG SSKIVLTSRI HDVASLAKDK YIIDLRPLES QHSWDLFCKE AFWKMEDKSC PRELEASGQK IVESCDGLPI
401: AIVCIGRLLS FRSQTSYEWE KVQKDIELQL TSNSILDMNL ILKVSLEDLS HNLKNCFLFC SLFPEVYRIR RKKLIRFWVS EGFIKRTETR TEEEIAEDYL
501: NELVNRCLLQ VTKRNEFGRV RECRMHDVVR VLALSKSKEE MFSAVYDCSK TTSLLGKARR MSIQSADSTL SSHEMTHVRS LLVFDKCVPI DALSASLTSL
601: KLLSVLDLHG IPIKSIPVQV FSLFNLRFLG LRGTEIDVLP KEIKKLQNLE VLDAYNTKIT SLPEEMTRLR KLRHLFASGI RDDTDSNVVV STGVAAPRGK
701: WHSTSLQTLQ NFKANDEMLQ SIACLSELRT LGTTDIRSGQ SASLCSAISK LSKLQHLLVS SKGDEALQLS SVQLPQTIQK LEVGGLLGQA TAHNLFTSIR
801: CLENITHLHL WFSMINQDLF RYLQSDCLLS LCILQAFQGE DMSFSAGSFP KLQSLVVHGA SQLRRIELEE GSMVNLVRLT VTGCPTLKEL PQGVEFLHKL
901: ETLQLEITVD DFLEKIQSEE EWEVHQSKIS HIKKVYVGFS GNE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.