Factsheet for TraesCS2A01G421000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	94.6	83.13
Zm00001d023923_P001	Maize	endoplasmic reticulum	70.89	62.57
HORVU1Hr1G092920.2	Barley	endoplasmic reticulum, golgi	60.85	53.95
Os12t0500500-01	Rice	endoplasmic reticulum, plasma membrane	58.97	52.16
TraesCS7A01G423400.1	Wheat	extracellular	47.55	40.32
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	22.84	35.34
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	26.85	34.97
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	23.84	34.67
TraesCS2A01G046700.1	Wheat	extracellular, plastid	30.74	33.84
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	16.44	32.03
TraesCS4A01G444700.1	Wheat	cytosol	15.31	32.02
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	33.75	31.28
TraesCS7A01G045800.1	Wheat	extracellular	32.25	30.56
TraesCS7A01G045600.1	Wheat	cytosol	23.09	29.87
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.25	29.77
TraesCS4A01G175700.1	Wheat	cytosol	32.25	29.71
TraesCS7A01G044900.1	Wheat	cytosol	32.62	29.68
TraesCS7A01G044200.1	Wheat	cytosol	31.87	29.6
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	34.0	29.59
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	34.0	29.59
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	33.63	29.35
TraesCS2A01G503900.1	Wheat	plasma membrane	33.63	29.23
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	33.5	29.12
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	33.25	28.96
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	33.25	28.96
TraesCS7A01G045900.1	Wheat	cytosol	33.25	28.93
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	33.12	28.79
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	33.0	28.68
TraesCS2A01G416600.1	Wheat	plastid	33.0	28.46
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	32.75	28.46
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	32.62	28.2
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	32.25	28.03
TraesCS3A01G447600.1	Wheat	cytosol	31.74	27.89
TraesCS4A01G224000.1	Wheat	cytosol	31.87	27.82
TraesCS4A01G224100.1	Wheat	cytosol	31.62	27.63
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	32.5	27.38
TraesCS7A01G077800.1	Wheat	cytosol	31.37	27.32
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	32.0	27.16
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.49	26.96
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	30.74	26.92
AT3G07040.1	Thale cress	cytosol	31.24	26.89
PGSC0003DMT400047578	Potato	plasma membrane	31.62	26.69
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	30.36	26.59
TraesCS2A01G197500.1	Wheat	golgi, vacuole	30.99	26.14
TraesCS4A01G376200.1	Wheat	cytosol	31.74	25.92
TraesCS2A01G093000.1	Wheat	cytosol	27.23	25.56
TraesCS5A01G192100.1	Wheat	mitochondrion	29.99	25.34
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	28.98	24.68
TraesCS1A01G018400.2	Wheat	cytosol	27.98	24.29
TraesCS3A01G321200.1	Wheat	cytosol	26.73	24.2
TraesCS1A01G016200.1	Wheat	cytosol	28.73	24.05
TraesCS2A01G480100.1	Wheat	cytosol	16.81	23.55
TraesCS4A01G393800.1	Wheat	cytosol	11.54	20.4
TraesCS4A01G444800.1	Wheat	mitochondrion	9.66	20.37
TraesCS7A01G046200.1	Wheat	cytosol	10.41	20.1
TraesCS7A01G045000.1	Wheat	cytosol	8.16	19.82
TraesCS4A01G224500.1	Wheat	cytosol	8.03	18.55
TraesCS7A01G046400.1	Wheat	cytosol	6.27	16.72

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0043531	InterPro:IPR001611
InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF19	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G421000	EnsemblPlants:TraesCS2A01G421000.1	InterPro:WH-like_DNA-bd_sf
TIGR:cd14798	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:676455210..676457603

Molecular Weight (calculated)

90725.9 Da

IEP (calculated)

9.248

GRAVY (calculated)

-0.237

Length

797 amino acids

Sequence
(BLAST)

001: MAEGLILVVL SKIAATFGGV ALNAIRLKLG KEGNILLETE NMMKQIEIEF EIMQAFISQV HPYSENNQIL KAWLKHIRKI ASEVEDIIDE YSFLLGKMDN
101: VEGLLNKALH RSKRVKAWKD ISAQLKQVQE RLQNLSTVKE RYGITVAAGL GGGSSHHNVT RKMYMSDSSY LSDNDNEEII GNEDEAKKLT QCINDDGLDR
201: TIISICGMGG SGKTTLVSSI CRKQKIRKNF DCYAWITVSP NYPVEDLLSK LIKQLYIPDE QAGTTDPTHL VDKIHSYLGN KRYLIVLDDM WNRDSWLFLE
301: RAFVKNKCRS RVIITTRTEA VASFAEDNQT IRIGLLPQRE SWDLFSRKAF SRQNRATSGC PQGLVPWAEK ILERCQGLPL AIVAIGSLLS YREMEEHEWK
401: LFYNQLNWQL TNNPELNWVS SFLKLSLDDL PSHLRNCFLY CGLFPENYRI RRKWIIRLWV AEGFVEDRGT ETTLEEVAED YLKELAQRSL IQVTERNEYG
501: RPKRFQVHDL VREMTPTISR KERFALIWNN PDVTDGGDEA SRVSVHRGGQ VFQPGPASQH LRSFLLFDKH VPVPWICAAS SNFRLLRVLC LRYSLLEHIP
601: EAITAGLFNL HYLDFSRTKV KTIPRSIARL KKLQSLHLRF ARVMELPREI AMLSSLRHLS VSNDLYGTSV TGSIWKLKHL QTLREVKANK DLVQNLGCLT
701: QLRSLGITAV LPSYGGDLWT SIGKMTVLTK LAVGTRGEND EVLSLDKFKP LRNVEKFYLT GKLENGVLFP VSEGFDKLKV LTNALVRAGA GPAQILV

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.