Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0500500-01 | Rice | endoplasmic reticulum, plasma membrane | 71.19 | 71.03 |
| TraesCS2D01G418000.1 | Wheat | endoplasmic reticulum, extracellular | 62.07 | 61.52 |
| TraesCS2A01G421000.1 | Wheat | endoplasmic reticulum | 53.95 | 60.85 |
| Zm00001d023923_P001 | Maize | endoplasmic reticulum | 60.29 | 60.02 |
| HORVU7Hr1G097880.1 | Barley | cytosol, extracellular | 42.49 | 40.64 |
| HORVU2Hr1G111750.1 | Barley | cytosol | 26.36 | 36.35 |
| HORVU2Hr1G010920.1 | Barley | cytosol | 26.14 | 35.66 |
| HORVU7Hr1G008210.1 | Barley | endoplasmic reticulum | 34.93 | 34.32 |
| HORVU7Hr1G006750.1 | Barley | cytosol | 26.36 | 33.95 |
| HORVU7Hr1G008240.3 | Barley | endoplasmic reticulum | 23.69 | 33.86 |
| HORVU1Hr1G002730.1 | Barley | cytosol | 20.47 | 33.15 |
| HORVU7Hr1G101110.1 | Barley | cytosol | 33.7 | 33.04 |
| HORVU7Hr1G008170.3 | Barley | endoplasmic reticulum | 33.7 | 32.97 |
| HORVU0Hr1G001780.1 | Barley | endoplasmic reticulum | 26.14 | 32.68 |
| HORVU1Hr1G002640.1 | Barley | plasma membrane | 33.59 | 32.3 |
| HORVU0Hr1G005590.2 | Barley | endoplasmic reticulum | 15.57 | 31.96 |
| HORVU3Hr1G001570.1 | Barley | plasma membrane | 32.15 | 31.76 |
| HORVU1Hr1G001810.2 | Barley | endoplasmic reticulum, golgi | 25.14 | 31.48 |
| HORVU3Hr1G001510.1 | Barley | extracellular, plasma membrane | 31.59 | 31.21 |
| HORVU2Hr1G007170.1 | Barley | plasma membrane | 31.48 | 31.1 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 32.15 | 30.61 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 31.59 | 30.5 |
| HORVU2Hr1G107970.1 | Barley | cytosol | 30.37 | 30.27 |
| HORVU2Hr1G098100.2 | Barley | cytosol | 27.36 | 30.26 |
| HORVU4Hr1G015800.1 | Barley | cytosol, endoplasmic reticulum | 30.59 | 29.79 |
| HORVU3Hr1G003810.4 | Barley | golgi, vacuole | 30.48 | 29.72 |
| AT3G07040.1 | Thale cress | cytosol | 30.37 | 29.48 |
| HORVU1Hr1G001490.2 | Barley | endoplasmic reticulum | 30.03 | 29.22 |
| HORVU5Hr1G057670.2 | Barley | mitochondrion | 30.92 | 28.9 |
| HORVU1Hr1G001630.1 | Barley | endoplasmic reticulum | 29.37 | 28.6 |
| HORVU1Hr1G005710.1 | Barley | endoplasmic reticulum | 29.48 | 28.53 |
| HORVU2Hr1G038230.12 | Barley | mitochondrion, plastid | 31.92 | 28.05 |
| HORVU3Hr1G096920.6 | Barley | cytosol | 29.37 | 27.73 |
| HORVU1Hr1G002620.1 | Barley | cytosol | 14.68 | 27.5 |
| HORVU3Hr1G014890.2 | Barley | cytosol | 30.26 | 25.86 |
| HORVU4Hr1G015770.3 | Barley | cytosol | 19.91 | 17.65 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU1Hr1G092920 | EnsemblPlants:HORVU1Hr1G092920.2 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| UniProt:M0WY56 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF19 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | UniParc:UPI0002966F70 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:551778566..551782953
Molecular Weight (calculated)
102842.0 Da
IEP (calculated)
8.409
GRAVY (calculated)
-0.198
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAVILVLL QKLASTLGGA TLKVFGSRLG KEAIFLLEVE NNMKEIEIEF DVMQAFINQV DPYLTNNQIF QCWLKHIRKV AFEVEDIIDE YAFLLGKMDG
101: TESFLRKTFR QSKNVMIWYN VASQLKQVKS RLQNLTTMKE RYGIKIYDND ETSSSHSISR KFYFSDSSYL NDHDNAIVGQ KDHLKKLLGC LNDAGPDRAI
201: IMIQGMGGSG KSTLARSIYR KQDVTLCHAW ISTSRNRQVE DILTNIIDKL DIGSDEHDNS DCEGMVKTIQ TYLQNRKYLI VLDDLWDRES WSCFDNAFPK
301: NSHGSIVIIT TRNEAVASLA EEEHTIRLGN LSEEESWDLF SKKAFMKLPE ATCPDGLISC AKKILEKCQG LPLAIAAIGS LLSYRGMEER EWKSFYNQLN
401: WQLTYNPELS RVSNVLSSSL NDLPTHLKNC FLYCGLFPED CEIRRKWIIR MWIAEGFVED RGAEITLEEV AEEYLKELIQ RSLIQVVERN EFGRPRRFKV
501: HNIVKEITRT SSKKQRFGLI CYNPVLTSLG DTERRVFVHA GGQDFQPGAA WQQLRSFLLF DKHVSVPWIR AASSSFRLLR VMCLRYSLLQ NFPNAIVGLF
601: NLYYLDLSRT KVKKIPKSVA RLKNLQTLHL RRTFVRKLPR EIKLLINLRH LSVSSDLYGT SILGNICGLK SLQTLRDVKA SKNLVQNLSF LTQLKTLSIT
701: NVLASQNKDL WSSVGKLTVL TRLAVASDAD DEILSIKNFR APQYLEKFYL DGKLADGALF PISGRFQNLK RLSMRLSGLV QDPVSALSEM TNLIYLELTC
801: AYNGESLVFC CGSFLKLRQL RLEKLENLNS VEINNGSMVN LTDIEFHDLG KLEYVPEGLT YLTKLQHLVA DKMPELFTRK LEEEHRNGFL QHIGSIECV
101: TESFLRKTFR QSKNVMIWYN VASQLKQVKS RLQNLTTMKE RYGIKIYDND ETSSSHSISR KFYFSDSSYL NDHDNAIVGQ KDHLKKLLGC LNDAGPDRAI
201: IMIQGMGGSG KSTLARSIYR KQDVTLCHAW ISTSRNRQVE DILTNIIDKL DIGSDEHDNS DCEGMVKTIQ TYLQNRKYLI VLDDLWDRES WSCFDNAFPK
301: NSHGSIVIIT TRNEAVASLA EEEHTIRLGN LSEEESWDLF SKKAFMKLPE ATCPDGLISC AKKILEKCQG LPLAIAAIGS LLSYRGMEER EWKSFYNQLN
401: WQLTYNPELS RVSNVLSSSL NDLPTHLKNC FLYCGLFPED CEIRRKWIIR MWIAEGFVED RGAEITLEEV AEEYLKELIQ RSLIQVVERN EFGRPRRFKV
501: HNIVKEITRT SSKKQRFGLI CYNPVLTSLG DTERRVFVHA GGQDFQPGAA WQQLRSFLLF DKHVSVPWIR AASSSFRLLR VMCLRYSLLQ NFPNAIVGLF
601: NLYYLDLSRT KVKKIPKSVA RLKNLQTLHL RRTFVRKLPR EIKLLINLRH LSVSSDLYGT SILGNICGLK SLQTLRDVKA SKNLVQNLSF LTQLKTLSIT
701: NVLASQNKDL WSSVGKLTVL TRLAVASDAD DEILSIKNFR APQYLEKFYL DGKLADGALF PISGRFQNLK RLSMRLSGLV QDPVSALSEM TNLIYLELTC
801: AYNGESLVFC CGSFLKLRQL RLEKLENLNS VEINNGSMVN LTDIEFHDLG KLEYVPEGLT YLTKLQHLVA DKMPELFTRK LEEEHRNGFL QHIGSIECV
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.