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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G044700.1 Wheat endoplasmic reticulum 66.61 76.46
TraesCS4A01G444700.1 Wheat cytosol 43.88 72.44
TraesCS7A01G046300.1 Wheat endoplasmic reticulum, extracellular 57.71 70.49
HORVU0Hr1G001780.1 Barley endoplasmic reticulum 67.89 59.39
TraesCS7A01G044300.2 Wheat endoplasmic reticulum, golgi 80.92 55.63
TraesCS7D01G039800.1 Wheat endoplasmic reticulum, golgi 79.81 54.8
HORVU7Hr1G006750.1 Barley cytosol 60.57 54.58
HORVU7Hr1G008210.1 Barley endoplasmic reticulum 73.61 50.6
HORVU7Hr1G101110.1 Barley cytosol 73.13 50.16
HORVU2Hr1G010920.1 Barley cytosol 51.99 49.62
HORVU7Hr1G008170.3 Barley endoplasmic reticulum 69.48 47.55
HORVU0Hr1G005590.2 Barley endoplasmic reticulum 32.75 47.03
HORVU2Hr1G111750.1 Barley cytosol 43.72 42.18
HORVU1Hr1G002640.1 Barley plasma membrane 58.35 39.25
HORVU1Hr1G002730.1 Barley cytosol 28.62 32.43
HORVU2Hr1G007170.1 Barley plasma membrane 38.0 26.26
HORVU2Hr1G107970.1 Barley cytosol 35.77 24.94
TraesCS7A01G046200.1 Wheat cytosol 16.38 24.94
HORVU4Hr1G015800.1 Barley cytosol, endoplasmic reticulum 34.82 23.73
HORVU1Hr1G092920.2 Barley endoplasmic reticulum, golgi 33.86 23.69
HORVU3Hr1G096920.6 Barley cytosol 35.77 23.63
HORVU7Hr1G097880.1 Barley cytosol, extracellular 34.34 22.98
HORVU2Hr1G098100.2 Barley cytosol 28.93 22.39
HORVU3Hr1G014890.2 Barley cytosol 36.09 21.58
AT3G07040.1 Thale cress cytosol 31.48 21.38
HORVU1Hr1G001810.2 Barley endoplasmic reticulum, golgi 24.17 21.17
HORVU3Hr1G003810.4 Barley golgi, vacuole 30.68 20.93
HORVU3Hr1G001510.1 Barley extracellular, plasma membrane 30.05 20.77
HORVU3Hr1G001570.1 Barley plasma membrane 29.73 20.55
HORVU1Hr1G001630.1 Barley endoplasmic reticulum 29.89 20.37
HORVU1Hr1G005710.1 Barley endoplasmic reticulum 30.05 20.34
Solyc08g005440.2.1 Tomato cytosol, extracellular 29.89 20.19
PGSC0003DMT400047578 Potato plasma membrane 30.05 20.02
HORVU1Hr1G001490.2 Barley endoplasmic reticulum 29.09 19.81
HORVU5Hr1G057670.2 Barley mitochondrion 29.89 19.54
TraesCS4A01G444800.1 Wheat mitochondrion 11.29 18.78
HORVU2Hr1G038230.12 Barley mitochondrion, plastid 29.89 18.38
HORVU1Hr1G002620.1 Barley cytosol 9.86 12.92
HORVU4Hr1G015770.3 Barley cytosol 18.76 11.64
TraesCS7A01G046400.1 Wheat cytosol 0.79 1.67
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A287VGD1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0043531EnsemblPlantsGene:HORVU7Hr1G008240EnsemblPlants:HORVU7Hr1G008240.3
InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR43886PANTHER:PTHR43886:SF5SUPFAM:SSF52058SUPFAM:SSF52540SignalP:SignalP-noTMUniParc:UPI000B46669A
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:+:10805491..10808581
Molecular Weight (calculated)
66621.8 Da
IEP (calculated)
7.477
GRAVY (calculated)
-0.263
Length
629 amino acids
Sequence
(BLAST)
001: MAEIVILLAI RKIGIALAKA AADQASVQLG KYGTQLLELQ GSMGRVGREL RIMHDVLCQM DIRSRNNQVY EGWLEEVQKV AYVXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXLSHLSDT KNRWVPTINN RDASNSNYIV KRSQDLANIS RSLDEEDLVG VDKNREKLEE WLEGDDLDYS
201: VIALLGMGGL GKTALAANVY KKEREKFQCH AWVSISQTYS REDVMRNIIK ELFKDNVSVL SSTLSMDIMS LEETVKKYLE QRKYLIILDD VWTYEAFYDL
301: SRMFVHNDKG SRVMLTTRDA HVAALASGGR ILTLEALPED KAWDLFCKKA FPSDTNHQCP TEMKPSSMEI VSKCKGLPLA IVSVGSMLRV REKTVEEWRR
401: INDQLGWEII NNSRLDHIRN VLHLSFIYLP TYLKSCFLYC SLFPEDYHFK RKQLVRLWTA EGFIEERGES TLEEVAECYL KELVDRNMLQ LVERNSFDRM
501: KKFRMHDLVR ELAIDLCKKN CFGVSYEDQC GGSLEMDGRR LVLHKLKKDI QQPFSNMHQL RTVITLGDSK SSFTLLPLLC NESRYLTVLE LSGLPIEKIP
601: DAIGDLFNLR YLGLRDSKVK KLPKSVEKL
Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)
001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
Arabidopsis Description
RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.