Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G016400.1 | Wheat | cytosol | 44.57 | 75.29 |
| HORVU1Hr1G002620.1 | Barley | cytosol | 49.16 | 73.54 |
| TraesCS1B01G021500.1 | Wheat | endoplasmic reticulum | 61.42 | 61.42 |
| HORVU1Hr1G005710.1 | Barley | endoplasmic reticulum | 75.77 | 58.56 |
| HORVU1Hr1G001630.1 | Barley | endoplasmic reticulum | 72.98 | 56.77 |
| HORVU1Hr1G001490.2 | Barley | endoplasmic reticulum | 72.84 | 56.6 |
| OQU79236 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 57.8 | 44.48 |
| EES08155 | Sorghum | cytosol | 55.99 | 44.08 |
| OQU83076 | Sorghum | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 57.1 | 43.94 |
| KXG27976 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 57.52 | 43.02 |
| EES08151 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.9 | 41.79 |
| HORVU3Hr1G001510.1 | Barley | extracellular, plasma membrane | 51.39 | 40.55 |
| HORVU3Hr1G001570.1 | Barley | plasma membrane | 51.25 | 40.44 |
| HORVU2Hr1G038230.12 | Barley | mitochondrion, plastid | 54.87 | 38.51 |
| HORVU3Hr1G003810.4 | Barley | golgi, vacuole | 46.66 | 36.33 |
| HORVU5Hr1G057670.2 | Barley | mitochondrion | 44.99 | 33.58 |
| HORVU2Hr1G111750.1 | Barley | cytosol | 28.83 | 31.75 |
| HORVU1Hr1G002730.1 | Barley | cytosol | 23.26 | 30.09 |
| HORVU7Hr1G006750.1 | Barley | cytosol | 28.55 | 29.37 |
| HORVU2Hr1G098100.2 | Barley | cytosol | 32.87 | 29.03 |
| HORVU0Hr1G005590.2 | Barley | endoplasmic reticulum | 17.13 | 28.08 |
| HORVU7Hr1G008210.1 | Barley | endoplasmic reticulum | 32.87 | 25.79 |
| HORVU7Hr1G008170.3 | Barley | endoplasmic reticulum | 32.73 | 25.57 |
| HORVU7Hr1G097880.1 | Barley | cytosol, extracellular | 33.29 | 25.43 |
| HORVU1Hr1G092920.2 | Barley | endoplasmic reticulum, golgi | 31.48 | 25.14 |
| AT3G07040.1 | Thale cress | cytosol | 32.31 | 25.05 |
| HORVU7Hr1G101110.1 | Barley | cytosol | 31.89 | 24.97 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 32.03 | 24.7 |
| HORVU1Hr1G002640.1 | Barley | plasma membrane | 31.89 | 24.49 |
| HORVU2Hr1G107970.1 | Barley | cytosol | 30.64 | 24.39 |
| HORVU2Hr1G010920.1 | Barley | cytosol | 22.28 | 24.28 |
| HORVU7Hr1G008240.3 | Barley | endoplasmic reticulum | 21.17 | 24.17 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 31.48 | 23.94 |
| HORVU0Hr1G001780.1 | Barley | endoplasmic reticulum | 23.68 | 23.64 |
| HORVU2Hr1G007170.1 | Barley | plasma membrane | 29.94 | 23.63 |
| HORVU4Hr1G015800.1 | Barley | cytosol, endoplasmic reticulum | 30.08 | 23.4 |
| HORVU3Hr1G096920.6 | Barley | cytosol | 30.5 | 23.0 |
| HORVU3Hr1G014890.2 | Barley | cytosol | 31.48 | 21.48 |
| KRG98601 | Soybean | cytosol | 8.77 | 16.67 |
| HORVU4Hr1G015770.3 | Barley | cytosol | 20.61 | 14.6 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G001810.2 | EnsemblPlantsGene:HORVU1Hr1G001810 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF24 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI000B480B7C | UniProt:A0A287EFV0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:+:3912425..3917172
Molecular Weight (calculated)
81020.7 Da
IEP (calculated)
6.751
GRAVY (calculated)
0.003
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWGMLGVGK TTLVAHVYSA MKLDFDAAAW VTISESYCIE DLLKKIVVEF GIAVDVANID MRGLAESIHD YLQGKKYILV LDDVWAARVW LEIRNVFPTS
101: NCTGRFVITS RKHEVSLLAT RESAIHLEPL QAHHSSVLFC KGAFWNNDDK QCPLELQKLA RKFVAKCQGL PIAIACIGRL LLCKPPTFAE WENLYTGLDS
201: QLAKDVIPDA HIILKVSLDD LPYDPKNCFL YCALFPEDYL LRRKTIMRQW IAEGFIREKE ENKTLVELVD RSLLQVVERN YTGRIRNCRM HDVIRLLALN
301: KAKEECFGKV YTGSVTQAFS VEGARRMSVQ GKNLEHLSRS GATQLRALHV FGRYIDIDLL KPILTSSNLL STLDLQGTCL KMLPDEVFDL FNLRYLGLRD
401: TDVESVPEAV GRLQNLEVLD ALRSKLKYLP NSVVKLQKLR YLYVSASVTF ETVSVAAVEV RNGIHHLAGL RALQYVKASP EFLREVGALI ELRTFGVCNV
501: RSEHSADLSN AIAKMSHHVH LEVIAAAENE MLQLEGLQLP PTLSFLGLRG QLEKPLMPRL SSSWSHLNKL TRLDLAFSSI DEGTFPCLLV LCGLCFLNLS
601: RAFEGKRLNL CAGSFPKLRD LYIWGASQLN QVEIEEGAIE NLVELSLADC PELKILPDGI EHLAALEKLH LEDTSEELIE KLRQNRGSDE CNEDVMKISH
701: IRNVTVELTQ KGLWERIR
101: NCTGRFVITS RKHEVSLLAT RESAIHLEPL QAHHSSVLFC KGAFWNNDDK QCPLELQKLA RKFVAKCQGL PIAIACIGRL LLCKPPTFAE WENLYTGLDS
201: QLAKDVIPDA HIILKVSLDD LPYDPKNCFL YCALFPEDYL LRRKTIMRQW IAEGFIREKE ENKTLVELVD RSLLQVVERN YTGRIRNCRM HDVIRLLALN
301: KAKEECFGKV YTGSVTQAFS VEGARRMSVQ GKNLEHLSRS GATQLRALHV FGRYIDIDLL KPILTSSNLL STLDLQGTCL KMLPDEVFDL FNLRYLGLRD
401: TDVESVPEAV GRLQNLEVLD ALRSKLKYLP NSVVKLQKLR YLYVSASVTF ETVSVAAVEV RNGIHHLAGL RALQYVKASP EFLREVGALI ELRTFGVCNV
501: RSEHSADLSN AIAKMSHHVH LEVIAAAENE MLQLEGLQLP PTLSFLGLRG QLEKPLMPRL SSSWSHLNKL TRLDLAFSSI DEGTFPCLLV LCGLCFLNLS
601: RAFEGKRLNL CAGSFPKLRD LYIWGASQLN QVEIEEGAIE NLVELSLADC PELKILPDGI EHLAALEKLH LEDTSEELIE KLRQNRGSDE CNEDVMKISH
701: IRNVTVELTQ KGLWERIR
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.