Factsheet for HORVU0Hr1G005590.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G111750.1	Barley	cytosol	79.68	53.53
HORVU1Hr1G002730.1	Barley	cytosol	50.46	39.82
HORVU7Hr1G006750.1	Barley	cytosol	58.9	36.96
TraesCS2D01G504500.1	Wheat	cytosol	75.57	36.1
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	75.34	35.99
TraesCS2A01G503900.1	Wheat	plasma membrane	74.89	35.77
HORVU7Hr1G008240.3	Barley	endoplasmic reticulum	47.03	32.75
HORVU7Hr1G008210.1	Barley	endoplasmic reticulum	63.01	30.16
HORVU7Hr1G101110.1	Barley	cytosol	63.01	30.1
HORVU7Hr1G008170.3	Barley	endoplasmic reticulum	61.42	29.27
HORVU0Hr1G001780.1	Barley	endoplasmic reticulum	47.95	29.21
HORVU2Hr1G010920.1	Barley	cytosol	39.73	26.4
HORVU1Hr1G002640.1	Barley	plasma membrane	53.65	25.13
HORVU1Hr1G002620.1	Barley	cytosol	21.23	19.38
HORVU2Hr1G007170.1	Barley	plasma membrane	36.76	17.69
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	28.08	17.13
HORVU2Hr1G107970.1	Barley	cytosol	33.79	16.41
HORVU3Hr1G096920.6	Barley	cytosol	34.47	15.86
HORVU1Hr1G092920.2	Barley	endoplasmic reticulum, golgi	31.96	15.57
HORVU4Hr1G015800.1	Barley	cytosol, endoplasmic reticulum	32.65	15.49
HORVU7Hr1G097880.1	Barley	cytosol, extracellular	33.1	15.43
HORVU2Hr1G098100.2	Barley	cytosol	28.54	15.38
HORVU3Hr1G003810.4	Barley	golgi, vacuole	30.82	14.64
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.05	14.61
AT3G07040.1	Thale cress	cytosol	30.14	14.25
PGSC0003DMT400047578	Potato	plasma membrane	30.59	14.19
HORVU3Hr1G001570.1	Barley	plasma membrane	29.22	14.07
HORVU3Hr1G001510.1	Barley	extracellular, plasma membrane	29.22	14.07
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	29.45	13.89
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	28.31	13.43
HORVU3Hr1G014890.2	Barley	cytosol	32.19	13.4
HORVU5Hr1G057670.2	Barley	mitochondrion	29.0	13.2
HORVU2Hr1G038230.12	Barley	mitochondrion, plastid	30.59	13.1
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	27.63	13.1
HORVU4Hr1G015770.3	Barley	cytosol	27.17	11.74

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A287DWF1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0043531	EnsemblPlantsGene:HORVU0Hr1G005590
EnsemblPlants:HORVU0Hr1G005590.2	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PANTHER:PTHR43886	PANTHER:PTHR43886:SF5	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B45F9FE
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:30755931..30757546

Molecular Weight (calculated)

45106.6 Da

IEP (calculated)

9.964

GRAVY (calculated)

-0.078

Length

438 amino acids

Sequence
(BLAST)

001: DLFIPMYLQS FMVVSFISIL TVASFKISSS LCSYLSSIMS RRISXXXXXX XXXXXXXXCK GLPLVIVLVG SLLRAREKTV EEWRRINAQL SWELINNSRL
101: DHIRNVLHLS FIYLPTHLKC GFLYCSLFSE DYCFKRKQLI RLWTAEGFIE ERGESTLEEV AEGCLKELID RNMLQPVKRN SFGRMKEFKM HDILRELALD
201: LWPKNCFGVT CEDKHGGSFE RNGRRLVLHK QKKYIQNSFS SVRRLRTFVT LDNSMVSFTL LPMLCKESRY MTVLELSGLS IENIPYAIGD RFNLRHLGLR
301: DSKVKMLPRS VEKLSNLLTL DLLRSDVHEL PSGIVNLKKL RHLFVEKRVN ADLRGIKCFS GVHVPNGLGN LTNLQTLQAL VAHDESIRHL RELRQLRXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XDTCRASL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.