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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G005590.2 Barley endoplasmic reticulum 53.53 79.68
TraesCS2A01G503900.1 Wheat plasma membrane 92.48 65.76
TraesCS2D01G504500.1 Wheat cytosol 92.18 65.54
TraesCS2B01G532200.1 Wheat endoplasmic reticulum 91.56 65.1
HORVU1Hr1G002730.1 Barley cytosol 50.0 58.74
HORVU7Hr1G006750.1 Barley cytosol 61.5 57.45
HORVU7Hr1G101110.1 Barley cytosol 76.38 54.31
HORVU7Hr1G008170.3 Barley endoplasmic reticulum 75.61 53.65
HORVU7Hr1G008210.1 Barley endoplasmic reticulum 75.15 53.55
HORVU7Hr1G008240.3 Barley endoplasmic reticulum 42.18 43.72
HORVU1Hr1G002640.1 Barley plasma membrane 61.81 43.1
HORVU0Hr1G001780.1 Barley endoplasmic reticulum 43.87 39.78
HORVU2Hr1G010920.1 Barley cytosol 34.51 34.14
HORVU1Hr1G002620.1 Barley cytosol 22.85 31.04
HORVU2Hr1G007170.1 Barley plasma membrane 41.72 29.89
HORVU1Hr1G001810.2 Barley endoplasmic reticulum, golgi 31.75 28.83
HORVU2Hr1G098100.2 Barley cytosol 34.97 28.04
HORVU2Hr1G107970.1 Barley cytosol 38.04 27.49
HORVU7Hr1G097880.1 Barley cytosol, extracellular 38.8 26.91
HORVU3Hr1G096920.6 Barley cytosol 38.8 26.58
HORVU1Hr1G092920.2 Barley endoplasmic reticulum, golgi 36.35 26.36
HORVU4Hr1G015800.1 Barley cytosol, endoplasmic reticulum 36.66 25.89
HORVU3Hr1G003810.4 Barley golgi, vacuole 34.97 24.73
HORVU3Hr1G001570.1 Barley plasma membrane 33.13 23.74
HORVU3Hr1G001510.1 Barley extracellular, plasma membrane 33.13 23.74
Solyc08g005440.2.1 Tomato cytosol, extracellular 33.59 23.52
AT3G07040.1 Thale cress cytosol 33.13 23.33
PGSC0003DMT400047578 Potato plasma membrane 33.44 23.09
HORVU1Hr1G005710.1 Barley endoplasmic reticulum 32.52 22.82
HORVU3Hr1G014890.2 Barley cytosol 36.66 22.72
HORVU1Hr1G001630.1 Barley endoplasmic reticulum 31.9 22.54
HORVU1Hr1G001490.2 Barley endoplasmic reticulum 30.67 21.64
HORVU2Hr1G038230.12 Barley mitochondrion, plastid 33.74 21.51
HORVU5Hr1G057670.2 Barley mitochondrion 31.44 21.31
HORVU4Hr1G015770.3 Barley cytosol 27.45 17.65
Protein Annotations
EnsemblPlants:HORVU2Hr1G111750.1EnsemblPlantsGene:HORVU2Hr1G111750Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARC
InterPro:P-loop_NTPasePANTHER:PTHR43886PANTHER:PTHR43886:SF5PFAM:PF00931PRINTS:PR00364SEG:seg
SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000296FA66UniProt:M0YYR1MapMan:35.1:
Description
No Description!
Coordinates
chrchr2H:-:724172323..724178745
Molecular Weight (calculated)
75264.9 Da
IEP (calculated)
8.247
GRAVY (calculated)
-0.161
Length
652 amino acids
Sequence
(BLAST)
001: MDITCLEETL RRFLEQRKYL IIFDDVWTPE AFDDLCRVLI NNDKGSRLMI TTREGGVAAL ASRGHTLTLE PLPEDKAWDL FCRKAFPRDT NHECPAELNP
101: LSEQIVSKCK GLPLVIVLVG SLLRAREKTV EEWRRINAQL SWELINNSRL DHIRNVLHLS FIYLPTHLKC GFLYCSLFSE DYCFKRKQLI RLWTAEGFIE
201: ERGESTLEEV AEGCLKELID RNMLQPVKRN SFGRMKEFKM HDILRELALD LWPKNCFGVT CEDKHGGSFE RNGRRLVLHK QKKYIQNSFS SVRRLRTFVT
301: LDNSMVSFTL LPMLCKESRY MTVLELSGLS IENIPYAIGD RFNLRHLGLR DSKVKMLPRS VEKLSNLLTL DLLRSDVHEL PSGIVNLKKL RHLFVEKRVN
401: ADLRGIKCFS GVHVPNGLGN LTNLQTLQAL VAHDESIRHL RELRQLRSLR LLDVKRIYCG RIVESLVQMQ CLSHLDVNAS DENEVLSLNV LLPNLQRLRL
501: GGRLAEGALD ESPLFQAVGG QNLHALNLYW SQLREDPLPS LSRLSNLTHL EFTRAYNGEQ LAFLTGWFPK LKILYLIDLP NLNRLEIQQG AMASLERLYL
601: VNLSGMMEVP PGIEFLMPLQ FLGFFEITSN FFWLLDQCSA VQGTQWRYTL RD
Best Arabidopsis Sequence Match ( AT1G58400.1 )
(BLAST)
001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKETIAMHG
301: NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD FSDGNNSSVY
401: HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD MMREVCLLKA
501: KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS GIGKLIHLRY
601: LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL RTLTIGLFKH
701: ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE LKEVRLDFRA
801: FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI PSVKFEKDYK
Arabidopsis Description
Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.