Factsheet for HORVU1Hr1G002620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	73.54	49.16
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	79.17	41.17
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	79.17	41.13
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	77.5	40.04
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	58.75	29.38
EES08155	Sorghum	cytosol	54.38	28.62
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.21	28.4
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.17	27.87
HORVU3Hr1G001570.1	Barley	plasma membrane	52.5	27.69
HORVU3Hr1G001510.1	Barley	extracellular, plasma membrane	52.08	27.47
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.0	25.92
HORVU2Hr1G038230.12	Barley	mitochondrion, plastid	55.21	25.9
HORVU1Hr1G002730.1	Barley	cytosol	28.96	25.05
HORVU2Hr1G111750.1	Barley	cytosol	31.04	22.85
HORVU3Hr1G003810.4	Barley	golgi, vacuole	43.75	22.78
HORVU5Hr1G057670.2	Barley	mitochondrion	43.33	21.62
HORVU0Hr1G005590.2	Barley	endoplasmic reticulum	19.38	21.23
HORVU2Hr1G098100.2	Barley	cytosol	29.38	17.34
HORVU7Hr1G006750.1	Barley	cytosol	23.33	16.05
HORVU7Hr1G008210.1	Barley	endoplasmic reticulum	30.21	15.85
HORVU7Hr1G008170.3	Barley	endoplasmic reticulum	30.21	15.78
AT3G07040.1	Thale cress	cytosol	30.42	15.77
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.0	15.47
HORVU7Hr1G097880.1	Barley	cytosol, extracellular	30.21	15.43
HORVU2Hr1G007170.1	Barley	plasma membrane	29.17	15.38
HORVU7Hr1G101110.1	Barley	cytosol	29.17	15.27
HORVU1Hr1G002640.1	Barley	plasma membrane	29.38	15.08
PGSC0003DMT400047578	Potato	plasma membrane	29.58	15.04
HORVU2Hr1G107970.1	Barley	cytosol	27.92	14.86
HORVU1Hr1G092920.2	Barley	endoplasmic reticulum, golgi	27.5	14.68
HORVU4Hr1G015800.1	Barley	cytosol, endoplasmic reticulum	27.08	14.08
HORVU3Hr1G096920.6	Barley	cytosol	27.92	14.08
HORVU4Hr1G015770.3	Barley	cytosol	27.5	13.02
HORVU3Hr1G014890.2	Barley	cytosol	28.12	12.83
HORVU2Hr1G010920.1	Barley	cytosol	15.21	11.08
HORVU0Hr1G001780.1	Barley	endoplasmic reticulum	16.04	10.71
HORVU7Hr1G008240.3	Barley	endoplasmic reticulum	12.92	9.86
KRG98601	Soybean	cytosol	0.83	1.06

Protein Annotations

EnsemblPlants:HORVU1Hr1G002620.1	EnsemblPlantsGene:HORVU1Hr1G002620	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43886
PANTHER:PTHR43886:SF24	SUPFAM:SSF52058	UniParc:UPI000B464A77	UniProt:A0A287EGR9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:-:5157568..5160339

Molecular Weight (calculated)

54190.3 Da

IEP (calculated)

7.761

GRAVY (calculated)

-0.079

Length

480 amino acids

Sequence
(BLAST)

001: MRQWITAGFI TEKDESKTLE EVAEGYLVEL VNRSLLRVVE RNHTGRLKCC QMHDVIRLLA LNKAKEECFG KGYNGSGGTG AFSIEGAGRI SVQCGNLEQL
101: SRSCARHLRA LHVFERYINV DLLKPIITSS NLLSTLDLQG TNIKMLPNEV FNLFNLRYLG LRNTEVESLP EVVGRLQNLE VLDALESKLM YLPKSIVKLR
201: KLRYLYVCTP ATSETVTIGG VKVPNGMQHL AGLRALQSIK ATPEFLREVA ALTELRTFDV CDVRREHSAD LSNAITKMSH LVHLGIAVAE DELLRLEGLN
301: LPPTLSMLTL GGQLEKTKMP QLFSSWSHLN SLTRLHLEFS NIDEQTLSCL FVLRGLRFLY LLKAFEGKRL DFYAGSFPKL RHLLIGYASQ LNQVGIEEGA
401: MQNLVELLFR DCPELKFLPD GIEHLAALEK LVLQDTSEEL IEKLRQKRDS DECSQDVMKI NHIRNVTVVL SHKGLVERIR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.