CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08155	Sorghum	cytosol	63.65	67.0
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.17	66.02
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.08	63.88
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.9	62.09
TraesCS1D01G014700.1	Wheat	peroxisome	29.9	58.81
HORVU1Hr1G002620.1	Barley	cytosol	29.38	58.75
TraesCS1D01G016400.1	Wheat	cytosol	25.62	57.88
HORVU1Hr1G001810.2	Barley	endoplasmic reticulum, golgi	43.02	57.52
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.65	55.68
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	41.46	55.43
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	53.12	54.9
TraesCS1D01G017600.1	Wheat	cytosol	52.71	54.82
TraesCS1A01G018400.2	Wheat	cytosol	52.08	54.47
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	52.29	54.39
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	52.5	54.31
TraesCS1A01G016200.1	Wheat	cytosol	53.65	54.1
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	51.98	54.0
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	52.5	53.85
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.94	53.82
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	51.88	53.78
EER94459	Sorghum	extracellular, vacuole	51.25	53.59
TraesCS1B01G022200.1	Wheat	cytosol	36.56	53.26
TraesCS1B01G020300.1	Wheat	cytosol	52.71	52.87
TraesCS1B01G020900.1	Wheat	cytosol	21.98	50.36
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	16.25	48.3
KXG26778	Sorghum	cytosol, plastid	32.19	32.98
KXG22876	Sorghum	cytosol	18.65	32.49
AT3G07040.1	Thale cress	cytosol	30.73	31.86
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.73	31.75
EER95978	Sorghum	cytosol	29.27	31.47
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.21	31.15
EES09609	Sorghum	cytosol	29.27	30.98
PGSC0003DMT400047578	Potato	plasma membrane	30.31	30.83
EES09588	Sorghum	cytosol	28.96	30.68
EES08313	Sorghum	cytosol	28.23	30.55
KXG33491	Sorghum	cytosol	26.25	30.25
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.44	30.0
KXG20758	Sorghum	cytosol	29.17	29.69
KXG20754	Sorghum	extracellular	29.06	29.43
KXG20759	Sorghum	extracellular	28.85	29.1
KXG20755	Sorghum	cytosol	28.23	28.62
KXG20757	Sorghum	cytosol	28.23	28.59
OQU84545	Sorghum	cytosol, endoplasmic reticulum	27.19	28.52
OQU83246	Sorghum	endoplasmic reticulum	24.17	27.99
KXG28194	Sorghum	endoplasmic reticulum	27.6	27.92
OQU83240	Sorghum	cytosol, extracellular	28.96	27.66
KRG98601	Soybean	cytosol	10.42	26.45

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PQN8	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	EnsemblPlants:KXG27976	ProteinID:KXG27976	ProteinID:KXG27976.1
InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886
PANTHER:PTHR43886:SF24	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3005G070500	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00081AB770	InterPro:WH-like_DNA-bd_sf	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:8284386..8287550

Molecular Weight (calculated)

108994.0 Da

IEP (calculated)

7.914

GRAVY (calculated)

-0.123

Length

960 amino acids

Sequence
(BLAST)

001: MADTVVGVLI GKLGAALRNE ALAYGVSQLS NEASNLKGLV GEICKAKEEL ESIKAYLHDS DKFKETSETT GIFVKKIRDL AFRIEDVVDE FTYKLEGDKH
101: EALSDKVRKR VRRVNIWSRL CVELRSINDE LEDTVKRRDR YAVPGMERNI GSYYDCRDTR SNNQTMCFAR EDDLVGIQDN VDKMTQWLVG DLEEKKNKIV
201: TVWGMGGAGK TTLVHHVYKA VKEEFDTAAW VTVSKSYKVA ELLANIAREL AISADARNME LIRLVELIRS SLKGKRYIIV LDDVWEADSW INIMDVFPTN
301: CTSRFVLTSR KYEVASLATS NCTIKLEPLE ENLSWKLFCN VAFRDNSEKR CPSELQELPA KFLQKCEGLP LAIACIGRLL SCKPLTYKAW ENIYKELQLQ
401: STKNAIPGVD MILKVSLEDL PCELKNCFLH CAIFPEDYQI KRRRLIRHWI TAGFIKEKER KTLEQEAEGY LNELVNRSLL QVVKTNEFGR VKHCRMHDVI
501: RSVALDQAEK ECFAKVYEGS KTFSIGTTTR RLSIQSTDIA MLGQSGAAHM RAIYAFTSYV DIDLLRPILA SSNLLATLDL QGTQINMLPN EVFSMFNLRF
601: LGLRHTRIEV LPEAVGRLQN LEVLDAFGTA LLSLPQDITK LKKLRFLYAS ARLTEGNLAR FGGVKVPRGI MNLTGLHALQ SVKASLETIC DCEVAALTEL
701: RTFTIADVTS EHSSNLCNAI TKMRHLASLS MVASSETEVL QLEELDLPKT LSKLELIGQL EKKRMPQIIS SWSYLHNLTR LSLLFSKLDE DSFSSLMVLR
801: GLCFLELGNA YDGKKLCFSA SSFPALKKLG ICGAPQLNQV EIEEGGLRNL VMLWFLQCPE LKCLPNGIER LTSLEDLYLY DTAQELIEKL RQEVNECGEL
901: SMKISHIRRV SVKLTKDNMW ERIRWQAASI PRGKTYFYTS IFLVFATRFQ SLLAYFFFLS

Best Arabidopsis Sequence Match ( AT5G35450.2 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.