Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030016_P001 | Maize | golgi, plasma membrane | 93.03 | 88.13 |
| TraesCS2B01G225000.1 | Wheat | cytosol | 74.4 | 78.87 |
| TraesCS2D01G205500.1 | Wheat | endoplasmic reticulum, extracellular | 78.54 | 78.37 |
| TraesCS2A01G197500.1 | Wheat | golgi, vacuole | 77.56 | 75.34 |
| Os10t0162832-01 | Rice | plasma membrane | 27.34 | 73.18 |
| HORVU2Hr1G038230.12 | Barley | mitochondrion, plastid | 78.32 | 70.28 |
| EES08155 | Sorghum | cytosol | 55.66 | 56.03 |
| OQU83076 | Sorghum | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 56.1 | 55.2 |
| OQU79236 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.49 | 52.63 |
| EES08151 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.74 | 51.3 |
| KXG27976 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 53.59 | 51.25 |
| KXG22876 | Sorghum | cytosol | 20.04 | 33.39 |
| EES08326 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.24 | 32.53 |
| KXG26778 | Sorghum | cytosol, plastid | 33.01 | 32.34 |
| EER95978 | Sorghum | cytosol | 31.26 | 32.14 |
| AT3G07040.1 | Thale cress | cytosol | 32.35 | 32.07 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 31.7 | 31.26 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 32.14 | 31.25 |
| OQU89669 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 26.47 | 31.23 |
| EES08313 | Sorghum | cytosol | 30.07 | 31.12 |
| KXG20758 | Sorghum | cytosol | 31.7 | 30.86 |
| EES09609 | Sorghum | cytosol | 30.39 | 30.76 |
| KXG20757 | Sorghum | cytosol | 31.48 | 30.49 |
| OQU84545 | Sorghum | cytosol, endoplasmic reticulum | 30.17 | 30.27 |
| EES09588 | Sorghum | cytosol | 29.74 | 30.13 |
| KXG20754 | Sorghum | extracellular | 31.05 | 30.06 |
| KXG20759 | Sorghum | extracellular | 31.15 | 30.04 |
| KXG33491 | Sorghum | cytosol | 26.58 | 29.29 |
| KXG20755 | Sorghum | cytosol | 29.41 | 28.51 |
| OQU83246 | Sorghum | endoplasmic reticulum | 24.4 | 27.02 |
| OQU83240 | Sorghum | cytosol, extracellular | 28.98 | 26.47 |
| KXG28194 | Sorghum | endoplasmic reticulum | 27.34 | 26.45 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:8055157 | UniProt:C5WRD7 | EnsemblPlants:EER94459 |
| ProteinID:EER94459 | ProteinID:EER94459.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | ProteinID:KXG38874.1 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF28 | InterPro:RX-like_CC | EnsemblPlantsGene:SORBI_3001G291000 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SignalP:SignalP-noTM |
| UniParc:UPI0001A82EB9 | RefSeq:XP_002467461.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:56790335..56794811
Molecular Weight (calculated)
105248.0 Da
IEP (calculated)
7.218
GRAVY (calculated)
-0.144
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGVVGILI LKLGSALVLE ACRLGTKQLY HEASALGRLF GEIRDIKEEL ESMQSFLQGA ERFKDTDNNT ANFIKKIRGL AFDIEDVIDE FIYKMEDKHG
101: SFAAKMKRRI NHIWTWRRLT SKLQEIKLKL ENVDKRNVRY DMRGIAREDG SSDTHYRSTD HISYFPKEEH LVGIDENKEL LMNWLRSDLQ QQSVITTVWG
201: MGGVGKTTLV AHVYNTVKVD FDSTAWITVS KAYQMEDLLK QIIRGFQKSD LKGELRVDII DMEKRNLVEI IRDYLRGKRY LLVLDDVWGI DIWFKISDAF
301: PTNSTSRFII TSRIHEVALL ANGNCIIELK PLEAHHSWEL FCKEAFWKNE NKMCPLELNN LAQRFVDKCN GLPIAIACIG RLLSCRSPTY SDWESLYKEL
401: ELQMTNNVIL NVNVVLKVSL EDLPYILKNC FLHCTIFPED YLIKRKRLIR HWVAEGFIRE TEHKTMEEVA EGYLYELVNR SLLQVVERNE SGRVQSCRMH
501: DIIRLLALTK ANEEGFCKVY DGMGSFSAEK TRRLSIHSAN IKQLTQPTEL TVRSIYVFSN DLTIDSLRPF LKHFYLLSTL DLQGAQIVEL PDEVFSLFNL
601: RFLSLRNTEV RNIPSTVGRL QKLEVLDVYN AKLLALPESV SKLRKLRYLH AATVPEINIK GVVAWTGIQV PKSIKYLTGL QALRLVEASS ETLCHLGALT
701: QLRTFAITNV QREQCADLCT VIMNMNHLVS LAIMAISEKE TLQLEELCLP PTLSKLELGG QLDKKAMPRI VSSFSDLGNL TLLTLAFSKL DEDSFSCLLM
801: LHGLRGLWVD KAYEGKRLHF NAMSFPNLRQ LAISDAPQLN SVVIERSALQ SLVQLTLVDC PELKALPDGI EHLRTLEKLY VRGASKELTE LFQWNEETHE
901: SNENLEKIGH IRRVTVYP
101: SFAAKMKRRI NHIWTWRRLT SKLQEIKLKL ENVDKRNVRY DMRGIAREDG SSDTHYRSTD HISYFPKEEH LVGIDENKEL LMNWLRSDLQ QQSVITTVWG
201: MGGVGKTTLV AHVYNTVKVD FDSTAWITVS KAYQMEDLLK QIIRGFQKSD LKGELRVDII DMEKRNLVEI IRDYLRGKRY LLVLDDVWGI DIWFKISDAF
301: PTNSTSRFII TSRIHEVALL ANGNCIIELK PLEAHHSWEL FCKEAFWKNE NKMCPLELNN LAQRFVDKCN GLPIAIACIG RLLSCRSPTY SDWESLYKEL
401: ELQMTNNVIL NVNVVLKVSL EDLPYILKNC FLHCTIFPED YLIKRKRLIR HWVAEGFIRE TEHKTMEEVA EGYLYELVNR SLLQVVERNE SGRVQSCRMH
501: DIIRLLALTK ANEEGFCKVY DGMGSFSAEK TRRLSIHSAN IKQLTQPTEL TVRSIYVFSN DLTIDSLRPF LKHFYLLSTL DLQGAQIVEL PDEVFSLFNL
601: RFLSLRNTEV RNIPSTVGRL QKLEVLDVYN AKLLALPESV SKLRKLRYLH AATVPEINIK GVVAWTGIQV PKSIKYLTGL QALRLVEASS ETLCHLGALT
701: QLRTFAITNV QREQCADLCT VIMNMNHLVS LAIMAISEKE TLQLEELCLP PTLSKLELGG QLDKKAMPRI VSSFSDLGNL TLLTLAFSKL DEDSFSCLLM
801: LHGLRGLWVD KAYEGKRLHF NAMSFPNLRQ LAISDAPQLN SVVIERSALQ SLVQLTLVDC PELKALPDGI EHLRTLEKLY VRGASKELTE LFQWNEETHE
901: SNENLEKIGH IRRVTVYP
001: MAEAFVSFGL EKLWDLLSRE SERLQGIDGQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLSGKGKG VKKHVRRLAC
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ
Arabidopsis Description
RPP8Disease resistance protein RPP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.