CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G321200.1	Wheat	cytosol	70.59	66.82
TraesCS3D01G310100.1	Wheat	cytosol	69.87	66.14
TraesCS3B01G344500.1	Wheat	cytosol	69.75	66.02
GSMUA_Achr6P29800_001	Banana	cytosol	52.82	50.17
EER95978	Sorghum	cytosol	30.73	28.67
EES08155	Sorghum	cytosol	30.37	27.74
KXG22876	Sorghum	cytosol	17.89	27.04
KXG20758	Sorghum	cytosol	30.49	26.94
KXG20754	Sorghum	extracellular	30.37	26.69
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.77	26.58
EER94459	Sorghum	extracellular, vacuole	29.29	26.58
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.53	26.57
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.65	26.47
KXG20755	Sorghum	cytosol	30.01	26.4
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.69	26.26
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.25	26.25
EES09609	Sorghum	cytosol	28.57	26.24
KXG20757	Sorghum	cytosol	29.53	25.95
KXG20759	Sorghum	extracellular	29.53	25.84
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	24.13	25.84
KXG26778	Sorghum	cytosol, plastid	29.05	25.83
EES08313	Sorghum	cytosol	27.49	25.82
EES09588	Sorghum	cytosol	27.49	25.28
OQU84545	Sorghum	cytosol, endoplasmic reticulum	27.61	25.14
KXG28194	Sorghum	endoplasmic reticulum	27.01	23.71
OQU83240	Sorghum	cytosol, extracellular	27.97	23.18
OQU83246	Sorghum	endoplasmic reticulum	22.33	22.44

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6Q6E9	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	EnsemblPlants:KXG33491	ProteinID:KXG33491
ProteinID:KXG33491.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF16	EnsemblPlantsGene:SORBI_3003G313700	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00081AD047
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:64171766..64174267

Molecular Weight (calculated)

93778.8 Da

IEP (calculated)

8.683

GRAVY (calculated)

-0.112

Length

833 amino acids

Sequence
(BLAST)

001: MQLFLHEVET CSGDGSATTE AWVHQMRDIM LDSEDVFDVL DANQVRACSI LGDLRAWSKV EAQIRRIKKQ LSDISRRRSE YPNLTNNNDP EDSSDKIIGL
101: LTSSPLVHDK DTVGLDRDLD ALLQHVLGEE SELSVMSLVG MGGVGKTTLA KKVYNHPDVK RHFDRSSWVY VSNKMELRGV LREMARGLVK IPSAEANSLS
201: EGQLQELLLS GLRGMRFLLV LDDVWEKGLW DVIKLVLPKN GMSRVLMTTR NVVVATSVID VRSDVHRLQP MTFGDSYNLF CRKAFLTDGV CPDDLIETAK
301: DIVRKCVGLP LAIVAAGSMM SRKKKNTEWT SVLESIQKDL SNGEMGVHQA LLLSYKDLPH PLKPCFLLLS VIPYDSEISR KKLVRLWIAE GFVKKKNDET
401: LETTAEKYLM ELIDRSMIET SVISSSGRVK ACRVHDLVHD LAISLSENGN FSVICHDKGA STSARRISLR TSHVQFHKEH KKKLRSVFMF NASAPVVLKS
501: NIVAKRFKLV RILDLENANV LKLPKEIGGL LHLRYLGLRG TKLKKLPRTL QKLYHLQTLD IRKTWINIIA FQIKCLRNLR NLEMKQDGRS IKVLTGLAQL
601: GELQVLTGLQ ASATVVHEIA NLTKLQKLSV EDLNNEDAEK LCSSVNNMKE LSYLSIFSGD AIRPLDIATL KPSSCLQKLH IAGPLQKLPV WFTQLDKLTK
701: LRLSFSKLEE DPLSVLAQLP NLLFLQLNKA YQGKVMRCCC PGFPNLKIFI ITELEELEEW DVDEGAMPCI QEVWIMSCEN LATVPTGLQS LTTLQRLRLV
801: GMPSSFTDRL GELSEDFVRV KHIPSIQIIQ QYG

Best Arabidopsis Sequence Match ( AT5G43470.3 )
(BLAST)

001: MAEAFVSFGL EKLWDLLSRE SERLQGIDGQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLSGKGKG VKKHVRRLAC
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ

Arabidopsis Description

RPP8Disease resistance protein RPP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.