Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G225000.1 | Wheat | cytosol | 81.92 | 96.77 |
| TraesCS2D01G205500.1 | Wheat | endoplasmic reticulum, extracellular | 87.0 | 96.74 |
| TraesCS2A01G197500.1 | Wheat | golgi, vacuole | 84.85 | 91.85 |
| EER94459 | Sorghum | extracellular, vacuole | 70.28 | 78.32 |
| Zm00001d030016_P001 | Maize | golgi, plasma membrane | 69.11 | 72.96 |
| Os10t0162832-01 | Rice | plasma membrane | 23.46 | 69.97 |
| HORVU3Hr1G001510.1 | Barley | extracellular, plasma membrane | 53.86 | 60.55 |
| HORVU3Hr1G001570.1 | Barley | plasma membrane | 53.08 | 59.67 |
| HORVU1Hr1G002620.1 | Barley | cytosol | 25.9 | 55.21 |
| HORVU1Hr1G001810.2 | Barley | endoplasmic reticulum, golgi | 38.51 | 54.87 |
| HORVU1Hr1G005710.1 | Barley | endoplasmic reticulum | 49.27 | 54.25 |
| HORVU1Hr1G001490.2 | Barley | endoplasmic reticulum | 48.09 | 53.25 |
| HORVU1Hr1G001630.1 | Barley | endoplasmic reticulum | 47.51 | 52.65 |
| HORVU3Hr1G003810.4 | Barley | golgi, vacuole | 45.26 | 50.22 |
| HORVU5Hr1G057670.2 | Barley | mitochondrion | 41.74 | 44.39 |
| HORVU2Hr1G111750.1 | Barley | cytosol | 21.51 | 33.74 |
| HORVU2Hr1G098100.2 | Barley | cytosol | 26.59 | 33.46 |
| HORVU2Hr1G010920.1 | Barley | cytosol | 21.51 | 33.38 |
| HORVU2Hr1G107970.1 | Barley | cytosol | 28.84 | 32.71 |
| HORVU7Hr1G006750.1 | Barley | cytosol | 21.99 | 32.23 |
| AT3G07040.1 | Thale cress | cytosol | 28.93 | 31.97 |
| HORVU1Hr1G092920.2 | Barley | endoplasmic reticulum, golgi | 28.05 | 31.92 |
| HORVU2Hr1G007170.1 | Barley | plasma membrane | 28.25 | 31.76 |
| HORVU7Hr1G097880.1 | Barley | cytosol, extracellular | 29.13 | 31.7 |
| HORVU7Hr1G008210.1 | Barley | endoplasmic reticulum | 28.25 | 31.58 |
| HORVU0Hr1G001780.1 | Barley | endoplasmic reticulum | 21.99 | 31.29 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 28.35 | 31.15 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 28.45 | 30.83 |
| HORVU7Hr1G008170.3 | Barley | endoplasmic reticulum | 27.66 | 30.79 |
| HORVU4Hr1G015800.1 | Barley | cytosol, endoplasmic reticulum | 27.76 | 30.77 |
| HORVU7Hr1G101110.1 | Barley | cytosol | 27.57 | 30.75 |
| HORVU0Hr1G005590.2 | Barley | endoplasmic reticulum | 13.1 | 30.59 |
| HORVU3Hr1G096920.6 | Barley | cytosol | 28.45 | 30.57 |
| HORVU1Hr1G002730.1 | Barley | cytosol | 16.52 | 30.45 |
| HORVU1Hr1G002640.1 | Barley | plasma membrane | 27.66 | 30.27 |
| HORVU7Hr1G008240.3 | Barley | endoplasmic reticulum | 18.38 | 29.89 |
| HORVU3Hr1G014890.2 | Barley | cytosol | 27.76 | 27.0 |
| HORVU4Hr1G015770.3 | Barley | cytosol | 18.28 | 18.44 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287HR26 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU2Hr1G038230 | EnsemblPlants:HORVU2Hr1G038230.12 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF28 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B483E2C | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:+:179088242..179095288
Molecular Weight (calculated)
116376.0 Da
IEP (calculated)
8.672
GRAVY (calculated)
-0.153
Length
1023 amino acids
Sequence
(BLAST)
(BLAST)
0001: STQAKRRVAA SFSPFQHSQP PKPSSPCRRS GAAPRPGILL CTTVHIFLAS VVRFGSAASY RPILWSLAGR CTTKNESNFL TPPCILMDIF TLERSQPVKI
0101: HSTMAEGIVG LLILKLGSAL AIEAVKVGTG KLCRQAKASS VVRLFGQIRD IKEELESMQS FLQEAERFKD TDNTTASFIN KIRGLAFEIE DVVDEFTYKL
0201: EDKHGGFSVK IKRRFKRIRT WRRLSLKLRD IKLKLENVDR RKARYDMRGI AIEARNSDAH CRSTDQTSYF PIEENLVGID ESKNLLIDWL TSDLQQENVI
0301: STVWGMGGVG KTTLVAHVYN TLKIDFDCAA WITVSKAYQV QDLLKQIIRE LQKSDLKGEL RVDIVDMKKR SLVEIIRDFL RGKKYLLVLD DVWGIDIWFK
0401: IRDAFPTNST SRFVITSRIH DVALLATGNC MVELKPLEEH HSWELFCKEA FWKNENRICP EELQSLAQRF VDKCNGLPIA IACIGRLLSC KSQTHSEWEK
0501: LYKELEVQLT NNAILDVNIV LMVSLGDLPY ILKNCFLHCI VFPEDYLIKR KRLIRHWVTA GFIRGTEHKT MEEVAEGYLY ELVNRSLLQV VERNESGRVR
0601: SCRMHDIIRL LALAKSNEER FCRVYDGSGS SSAENTRRLS IQSANIEQLT LSSEVQLRSI YVFETGLIVD SLRSFLKSFK LLSTLDLQGS KIRRLPNEVF
0701: NMFNLRFLGL RDTEVEDIPR TVGRLQKLEV LDAYNAKLLS LPESVATLRK LRYLYVATDP KTNSKGVVAW TGIQVPNGIR HLTDLQALQL VEASSETLCH
0801: LGALTELRTL SITKVQRDHC ADLCNAIMNM THLVSLAIMA INEKETLELE ELCLPPTLSK LEIGGQLDKK RMPQIVSSFS DHENITLLAL AFSKLDEDSF
0901: SCLLVLHGLR ALWLDKAYEG KRLHFNAMAF PKLRLLSISD APQLNDVVVE ESALQSLVDL SLTDCPELKV LPDGIEHLRT LEKLYLRGVS KDLTKKLQNK
1001: ETTNECNDYL KKINHVRRVT VYP
0101: HSTMAEGIVG LLILKLGSAL AIEAVKVGTG KLCRQAKASS VVRLFGQIRD IKEELESMQS FLQEAERFKD TDNTTASFIN KIRGLAFEIE DVVDEFTYKL
0201: EDKHGGFSVK IKRRFKRIRT WRRLSLKLRD IKLKLENVDR RKARYDMRGI AIEARNSDAH CRSTDQTSYF PIEENLVGID ESKNLLIDWL TSDLQQENVI
0301: STVWGMGGVG KTTLVAHVYN TLKIDFDCAA WITVSKAYQV QDLLKQIIRE LQKSDLKGEL RVDIVDMKKR SLVEIIRDFL RGKKYLLVLD DVWGIDIWFK
0401: IRDAFPTNST SRFVITSRIH DVALLATGNC MVELKPLEEH HSWELFCKEA FWKNENRICP EELQSLAQRF VDKCNGLPIA IACIGRLLSC KSQTHSEWEK
0501: LYKELEVQLT NNAILDVNIV LMVSLGDLPY ILKNCFLHCI VFPEDYLIKR KRLIRHWVTA GFIRGTEHKT MEEVAEGYLY ELVNRSLLQV VERNESGRVR
0601: SCRMHDIIRL LALAKSNEER FCRVYDGSGS SSAENTRRLS IQSANIEQLT LSSEVQLRSI YVFETGLIVD SLRSFLKSFK LLSTLDLQGS KIRRLPNEVF
0701: NMFNLRFLGL RDTEVEDIPR TVGRLQKLEV LDAYNAKLLS LPESVATLRK LRYLYVATDP KTNSKGVVAW TGIQVPNGIR HLTDLQALQL VEASSETLCH
0801: LGALTELRTL SITKVQRDHC ADLCNAIMNM THLVSLAIMA INEKETLELE ELCLPPTLSK LEIGGQLDKK RMPQIVSSFS DHENITLLAL AFSKLDEDSF
0901: SCLLVLHGLR ALWLDKAYEG KRLHFNAMAF PKLRLLSISD APQLNDVVVE ESALQSLVDL SLTDCPELKV LPDGIEHLRT LEKLYLRGVS KDLTKKLQNK
1001: ETTNECNDYL KKINHVRRVT VYP
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.