Factsheet for TraesCS1A01G016200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	88.45	90.73
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	85.61	87.73
TraesCS1A01G018400.2	Wheat	cytosol	75.74	78.54
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	74.58	75.85
EES08155	Sorghum	cytosol	54.41	56.8
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.25	56.38
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.73	55.84
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	52.21	54.62
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	51.79	54.18
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.1	53.65
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.79	53.24
TraesCS2A01G197500.1	Wheat	golgi, vacuole	51.89	52.28
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	43.8	45.23
TraesCS5A01G192100.1	Wheat	mitochondrion	41.7	42.1
TraesCS7A01G077800.1	Wheat	cytosol	40.34	41.97
TraesCS4A01G376200.1	Wheat	cytosol	40.55	39.55
TraesCS2A01G046700.1	Wheat	extracellular, plastid	25.84	33.98
TraesCS7A01G045600.1	Wheat	cytosol	21.64	33.44
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	18.7	32.48
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	20.8	32.35
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	17.44	32.23
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	30.88	32.06
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	13.66	31.78
AT3G07040.1	Thale cress	cytosol	30.67	31.53
TraesCS3A01G447600.1	Wheat	cytosol	30.04	31.53
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.67	31.36
TraesCS4A01G175700.1	Wheat	cytosol	28.47	31.33
TraesCS2A01G503900.1	Wheat	plasma membrane	30.15	31.3
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.04	31.19
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.83	31.11
TraesCS4A01G224000.1	Wheat	cytosol	29.83	31.11
TraesCS2A01G416600.1	Wheat	plastid	30.15	31.06
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	29.83	30.97
PGSC0003DMT400047578	Potato	plasma membrane	30.67	30.93
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	29.73	30.9
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	29.73	30.9
TraesCS7A01G044900.1	Wheat	cytosol	28.36	30.82
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	30.57	30.76
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	29.52	30.64
TraesCS7A01G044200.1	Wheat	cytosol	27.52	30.54
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	29.41	30.53
TraesCS4A01G224100.1	Wheat	cytosol	28.99	30.26
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	29.83	30.24
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	27.21	30.12
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	28.99	30.1
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	28.57	29.73
TraesCS7A01G045000.1	Wheat	cytosol	10.19	29.57
TraesCS3A01G321200.1	Wheat	cytosol	27.31	29.55
TraesCS2A01G093000.1	Wheat	cytosol	26.26	29.45
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	28.26	29.4
TraesCS7A01G045800.1	Wheat	extracellular	25.95	29.37
TraesCS7A01G045900.1	Wheat	cytosol	28.15	29.26
TraesCS7A01G423400.1	Wheat	extracellular	28.78	29.15
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	24.05	28.73
TraesCS4A01G444700.1	Wheat	cytosol	11.45	28.61
TraesCS7A01G046400.1	Wheat	cytosol	8.93	28.43
TraesCS4A01G444800.1	Wheat	mitochondrion	11.24	28.31
TraesCS2A01G480100.1	Wheat	cytosol	16.81	28.12
TraesCS4A01G224500.1	Wheat	cytosol	10.08	27.83
KRG98601	Soybean	cytosol	11.03	27.78
TraesCS7A01G046200.1	Wheat	cytosol	11.55	26.63
TraesCS4A01G393800.1	Wheat	cytosol	11.87	25.06

Protein Annotations

EnsemblPlants:TraesCS1A01G016200.1	EnsemblPlantsGene:TraesCS1A01G016200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1A:-:8629947..8633154

Molecular Weight (calculated)

106868.0 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.072

Length

952 amino acids

Sequence
(BLAST)

001: MAEAVVGQLV VSLGAALAKE TAIFGGALLS KEAAAIRGLF GKIRDSKAEL ESMQAYLQEA ERFKDTDKTT AIFVGEVRGL AFQIEDVIDE FTYKLEDCRH
101: GGFAGKMKKR LKHIKTWRRL AAKLQEIDVK LKDAKRRKQD YAVVAGTGGS AFAARSTSRG QALHFTRDED LVGIEENKEK LIRWLTVSGG SGHGLEQNNC
201: KVTTVWGMPG VGKTTLVAHV YNTVKVDFDA AAWVTVSESY HIEDLLKKIA AQFGITVDVA DIEMRDLAES IHDYLQGKKF IMVLDDVWAA RVWLEIRNVF
301: PTSNFTSRFV ITSRKHEVSL LATRESAIHL EPLQEHHSWL LFCNGAFWNT DDKECPVELQ ELARKFITKC QGLPIAIACI GRLLSLKPPT SAEWEDVYSG
401: LDSQLAKDVI PDAHMILKFS LEDLPYDLKN CFLHCALSPE DYVLKRRKTM RLWIAAGFIR EKDESKTLEE VAEGYLAELV NRSLLQVVER NYAGRLKYCR
501: MHDVIRLLAL NKAKEECFGK IYNGSATRAF SVEGARRVSV HGGNLEQLSR SGTTHLRALY VFERYIEVDL LKTILTSSKL LTMLDLQGTC IKMLPSEVFN
601: LFNLRYLGLR DTGMESLPEA VGRLQNLEVL DASKSKLTYL PNSVVKLKKL RYLYAWSVVA SEEFEIGNLG GVKVPNGIQQ LAGLQALQSV QATPEFLLEV
701: AALTELRTFG VCNVRSENSA CLSNTITKMS HLVHLEIVAA TENELLQFEG LYLPPTLSSL GLAGQLEKTS IPQLFSSWSH LDSLTRLHLA FSNIDEQTFS
801: CLRMLRGLHF LEVMKAFEGT RLEFCAGSFP KLRFLHIWGA AQLNQVRIEE SALKILAEVW FTDCPELKFL PDGIEHLAAL EKLILKDTSE ELIKKLGQMR
901: DSDEYGEDVM KISHIRNVTV ALSHKGFEER IRFYAAISST FCSSHIGAHF AY

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.