Factsheet for TraesCS6A01G056200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G046700.1	Wheat	extracellular, plastid	52.44	62.29
Zm00001d035174_P001	Maize	endoplasmic reticulum	32.44	62.14
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	59.65	55.94
Zm00001d035183_P004	Maize	endoplasmic reticulum	56.05	53.26
Zm00001d035172_P001	Maize	endoplasmic reticulum	54.19	52.48
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	37.09	51.7
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	57.44	51.46
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	45.0	49.74
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	29.19	41.01
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	25.47	39.96
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	23.72	39.61
TraesCS7A01G044900.1	Wheat	cytosol	37.79	37.1
TraesCS7A01G045600.1	Wheat	cytosol	26.4	36.85
TraesCS4A01G175700.1	Wheat	cytosol	36.51	36.3
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	38.6	36.24
TraesCS7A01G045900.1	Wheat	cytosol	38.49	36.14
TraesCS7A01G044200.1	Wheat	cytosol	35.93	36.01
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	38.26	35.88
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	38.14	35.85
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.91	35.71
TraesCS4A01G444700.1	Wheat	cytosol	15.81	35.7
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	38.02	35.66
TraesCS7A01G045800.1	Wheat	extracellular	34.77	35.55
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	37.79	35.52
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	37.79	35.48
TraesCS2A01G503900.1	Wheat	plasma membrane	37.67	35.33
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	37.67	35.33
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	37.21	34.9
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	31.28	33.75
TraesCS4A01G224100.1	Wheat	cytosol	34.07	32.13
TraesCS4A01G224000.1	Wheat	cytosol	33.49	31.54
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	14.88	31.3
TraesCS3A01G447600.1	Wheat	cytosol	32.91	31.2
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	32.21	30.21
TraesCS2A01G480100.1	Wheat	cytosol	19.88	30.05
TraesCS7A01G046200.1	Wheat	cytosol	14.42	30.02
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	32.33	29.61
TraesCS7A01G423400.1	Wheat	extracellular	32.33	29.57
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	30.93	29.23
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	32.09	29.18
TraesCS4A01G444800.1	Wheat	mitochondrion	12.79	29.1
TraesCS4A01G393800.1	Wheat	cytosol	15.23	29.05
TraesCS2A01G416600.1	Wheat	plastid	31.16	29.0
TraesCS7A01G077800.1	Wheat	cytosol	30.47	28.63
TraesCS2A01G197500.1	Wheat	golgi, vacuole	31.28	28.47
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	30.12	28.46
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	30.47	28.42
TraesCS7A01G045000.1	Wheat	cytosol	10.7	28.05
TraesCS2A01G093000.1	Wheat	cytosol	27.56	27.92
TraesCS1A01G018400.2	Wheat	cytosol	29.77	27.89
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.0	27.71
TraesCS3A01G321200.1	Wheat	cytosol	28.26	27.61
AT3G07040.1	Thale cress	cytosol	29.53	27.43
PGSC0003DMT400047578	Potato	plasma membrane	29.88	27.22
TraesCS1A01G016200.1	Wheat	cytosol	30.12	27.21
TraesCS4A01G376200.1	Wheat	cytosol	30.7	27.05
TraesCS5A01G192100.1	Wheat	mitochondrion	29.65	27.04
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	29.07	26.71
TraesCS4A01G224500.1	Wheat	cytosol	10.23	25.51
TraesCS7A01G046400.1	Wheat	cytosol	8.84	25.42

Protein Annotations

EnsemblPlants:TraesCS6A01G056200.1	EnsemblPlantsGene:TraesCS6A01G056200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF6	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:+:29608058..29610640

Molecular Weight (calculated)

97692.4 Da

IEP (calculated)

8.529

GRAVY (calculated)

-0.214

Length

860 amino acids

Sequence
(BLAST)

001: MAESALLLVI QKIGTAVAAE TFNFTIPLLA RKSAAVAALP NDMKMIRNQL ELIRAFLEDT GRKGCTDRVI EAWTGQARKL AYDMEDIVDQ FIYVVGKHNV
101: QEGSWWCCMK KIAKKPQSLF TLDQIATAIG GIKQQLRELK ENKDWTQPIG GVRNDILATE YDSHYAPGQD YSIADDELVG IDKDRKIWIK SLLLEGGPGR
201: RLIALWGMGG IGKSTLVNSL YKSEASKFDC HAWVSVSQSY ILEDIWRNML RGLRKNFKEE SDASNMNSTV EKVEKMSSEE LQAELKQILG GKRYLIVLDD
301: VWRPQHLQEI QQVLIDNGLG SRAITTTRSE EVAEVAELAE AGCKIKVEPL EADDAWRLFC RKAFPRFENN ICPTELVQCG KDIVNKCGGL PLALVAIGSI
401: LSLKVRNVRV WRLFYEQLNW ELHNNENLSH VEKILNLSYK YLPNHLKSCF LYCAMFPEDY WIQRKRLIRL WISEGFVPQA GALFLEEVAE GYLEELVQRS
501: MLHVVERNSS GRLRRVQMHD IVRELAISQS KKECFSTTYD DTHVRDQHVG LDSRRVSVLR CKNGLGSSIH PAARLRSLIA FDSTVRSSAP LFPSESKYIA
601: VLELSGLPID TIPDSVGELF NIKYLGLDRT NVKKLPSSVT KLHNLETLSI RDGQCLSLPR GSQRLKRLRH ILIYKMLDKT WSRFRSHESM VPFEGMWDLQ
701: ELQSLHTVGA NKVFVAKLGN LSQMRFLLIT EVKSSYCPQL CDSISKLRHL SRLELRASYC EEVLQLDNLT LPKRLDKLTL VGGLSQGFLE SPFFSKHGDE
801: LVRLELYYSQ LVVDPTPRLY RLAKLSRIVL RSAYIGQARP VVANASEISK LRDELPADST

Best Arabidopsis Sequence Match ( AT1G59780.1 )
(BLAST)

001: MQDLYMVDSI VSFGVEKLWK LLSQEYERFQ GVEEQITELR DDLKMLMAFL SDADAKKQTR ALARNCLEEI KEITYDAEDI IEIFLLKGSV NMRSLACFPG
101: GRREIALQIT SISKRISKVI QVMQNLGIKS DIMDGVDSHA QLERKRELRH TFSSESESNL VGLEKNVEKL VEELVGNDSS HGVSITGLGG LGKTTLARQI
201: FDHDKVKSHF DGLAWVCVSQ EFTRKDVWKT ILGNLSPKYK DSDLPEDDIQ KKLFQLLETK KALIVFDDLW KREDWYRIAP MFPERKAGWK VLLTSRNDAI
301: HPHCVTFKPE LLTHDECWKL LQRIAFSKQK TITGYIIDKE MVKMAKEMTK HCKRLPLAVK LLGGLLDAKH TLRQWKLISE NIISHIVVGG TSSNENDSSS
401: VNHVLSLSFE GLPGYLKHCL LYLASYPEDH EIEIERLSYV WAAEGITYPG NYEGATIRDV ADLYIEELVK RNMVISERDA LTSRFEKCQL HDLMREICLL
501: KAKEENFLQI VTDPTSSSSV HSLASSRSRR LVVYNTSIFS GENDMKNSKL RSLLFIPVGY SRFSMGSNFI ELPLLRVLDL DGAKFKGGKL PSSIGKLIHL
601: KYLSLYQASV TYLPSSLRNL KSLLYLNLRI NSGQLINVPN VFKEMLELRY LSLPWERSSL TKLELGNLLK LETLINFSTK DSSVTDLHRM TKLRTLQILI
701: SGEGLHMETL SSALSMLGHL EDLTVTPSEN SVQFKHPKLI YRPMLPDVQH FPSHLTTISL VYCFLEEDPM PTLEKLLQLK VVSLWYNAYV GRRMVCTGGG
801: FPPLHRLEIW GLDALEEWIV EEGSMPLLHT LHIVDCKKLK EIPDGLRFIS SLKELAIRTN EKVFQKKVSK GGEDYYKMQH VPLIRYNWPQ EPENNEVIYS
901: FPSPII

Arabidopsis Description

Putative disease resistance protein At1g59780 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.