Factsheet for TraesCS1A01G016400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
cytosol 1
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G017400.1	Wheat	cytosol	46.93	86.89
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	81.82	84.96
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	81.29	84.14
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	81.29	83.95
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	80.76	83.41
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	80.13	82.66
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	34.04	78.73
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	76.64	77.21
TraesCS2A01G093000.1	Wheat	cytosol	65.33	72.79
TraesCS4A01G224500.1	Wheat	cytosol	23.89	65.51
Os11t0229300-00	Rice	cytosol	43.34	62.98
Os11t0227700-01	Rice	cytosol	42.92	62.75
TraesCS4A01G224000.1	Wheat	cytosol	58.14	60.24
TraesCS4A01G224100.1	Wheat	cytosol	57.29	59.43
TraesCS3A01G447600.1	Wheat	cytosol	56.45	58.88
EES09609	Sorghum	cytosol	54.86	57.22
TraesCS2A01G480100.1	Wheat	cytosol	32.98	54.83
TraesCS7A01G045600.1	Wheat	cytosol	24.63	37.82
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	24.0	37.09
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	19.98	36.7
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	21.04	36.31
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	34.88	36.03
TraesCS2A01G503900.1	Wheat	plasma membrane	34.67	35.77
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.25	35.33
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	34.14	35.26
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	33.93	35.16
TraesCS4A01G175700.1	Wheat	cytosol	32.14	35.14
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	34.04	35.11
TraesCS7A01G044200.1	Wheat	cytosol	31.82	35.08
TraesCS4A01G444800.1	Wheat	mitochondrion	13.95	34.92
TraesCS4A01G444700.1	Wheat	cytosol	14.06	34.91
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	33.62	34.75
TraesCS7A01G045900.1	Wheat	cytosol	33.51	34.61
TraesCS7A01G044900.1	Wheat	cytosol	31.92	34.47
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	33.4	34.46
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	33.3	34.43
TraesCS7A01G046200.1	Wheat	cytosol	15.01	34.38
TraesCS2A01G046700.1	Wheat	extracellular, plastid	26.11	34.12
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	32.88	33.91
TraesCS7A01G045000.1	Wheat	cytosol	11.52	33.23
TraesCS7A01G046400.1	Wheat	cytosol	10.47	33.11
TraesCS7A01G045800.1	Wheat	extracellular	29.28	32.94
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	27.38	32.5
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	31.29	32.28
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	29.18	32.09
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	29.81	30.59
TraesCS1A01G016200.1	Wheat	cytosol	30.76	30.57
TraesCS7A01G423400.1	Wheat	extracellular	30.34	30.53
TraesCS4A01G393800.1	Wheat	cytosol	14.48	30.38
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	28.96	30.11
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	28.75	29.89
TraesCS2A01G197500.1	Wheat	golgi, vacuole	29.49	29.52
TraesCS1A01G018400.2	Wheat	cytosol	28.65	29.52
TraesCS7A01G077800.1	Wheat	cytosol	28.44	29.4
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	28.96	29.27
TraesCS5A01G192100.1	Wheat	mitochondrion	28.44	28.53
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.01	28.46
PGSC0003DMT400047578	Potato	plasma membrane	28.12	28.18
TraesCS2A01G416600.1	Wheat	plastid	27.48	28.14
AT3G07040.1	Thale cress	cytosol	27.06	27.65
TraesCS4A01G376200.1	Wheat	cytosol	28.44	27.56
TraesCS3A01G321200.1	Wheat	cytosol	25.48	27.39

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1A01G016400	EnsemblPlants:TraesCS1A01G016400.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1A:-:8715675..8718515

Molecular Weight (calculated)

106380.0 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.113

Length

946 amino acids

Sequence
(BLAST)

001: MHQLLLVVFD PSFLYDASYN LLGVGVFQKR MAEAILIAVS KIGTVVLNEA VTAVVQKLSR KVDALKELPA KVKIIDIELT TMKDIIQDFG TTQLSNNVIK
101: GWIGHVRKLA YRVEDVIDKY SYEALKLKDE GFLHRYIFRG SRHIKVFSKI ADEVEEIEKE MLRIKGLSKL WRDTVQPIKT DHAKIDKQRS GSCFPERFSD
201: EDLVGIEENR SKLTEWLTSD DKESTVITIS GMGGLGKTTL VKNVFDREKT NFPDAHAWIV VSQAYDVVDL LGALFTKIQH TQESLMPPIL SVGAKADVYE
301: LIEAIKKILQ GKKCLIVLDD VWDTEAYTQM CNAFQGLQGS RVMITTRKED VAALAPPSRR LLLQPLGSAE SFKLFCSRAF HNSPDHECPP ELEKVAADVV
401: ERCHGLPLAI VSSGSLLSKK QATEHAWNHM YNHLRSELRG NNHVQAVLNL SYRDLPGDLR NCLLYCSLFP EDYAMPREIL VRLWVAEGFA MKKENSTPEE
501: VAEGNLMELI SRNMLEVVEW DELSRVSKCK MHDIVRDLAL AVAKDEKFGS ANDPGEMILM DKEVRRFSTY GWVDTKAAAG VEFPRLRTIL SLAAASSSTN
601: MLSSVLSGSS YLTVLELQDS AITQVPASIG NLFNLRYIGL RRTNVQSLPD TICKLSNLET LDIKQTRVEN LPPGIVKVEK LRHLLADRFA DEKQTEFRYF
701: VGVEAPQMIS NFQELQTLET VHASKDLSLE LKKMKKLQTV WVDNINASNC DDLFKTLSDM TLLSSLLLSA FDEKVTISFQ ALKPVSKNLH RLIIRGGWAD
801: GTLKCPIFQG HGRNLKYLAL SWCNLGKEDP LQLLASHLPA LTYLSLNRVS SAAILVLSAG SFSKLKTLVL KCMPNVKQLE IEEGAIPHID GIYIVSLSEL
901: NMVPRGIESL GTLKKLWMLG LHKDFKAQWN LNQMHNKMKH VPELRS

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.