Factsheet for TraesCS1A01G018400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G017600.1	Wheat	cytosol	84.86	84.4
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	82.14	81.6
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	83.01	81.41
TraesCS1B01G022200.1	Wheat	cytosol	57.63	80.27
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	78.43	78.01
TraesCS1A01G016200.1	Wheat	cytosol	78.54	75.74
EES08155	Sorghum	cytosol	56.64	57.02
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.52	56.59
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.21	55.31
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	53.81	54.29
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	53.59	54.07
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.03	53.56
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.47	52.08
TraesCS2A01G197500.1	Wheat	golgi, vacuole	51.85	50.37
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	44.77	44.58
TraesCS7A01G077800.1	Wheat	cytosol	41.94	42.08
TraesCS5A01G192100.1	Wheat	mitochondrion	43.03	41.89
TraesCS4A01G376200.1	Wheat	cytosol	42.27	39.75
TraesCS2A01G046700.1	Wheat	extracellular, plastid	26.03	33.01
TraesCS7A01G045600.1	Wheat	cytosol	21.9	32.63
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	21.46	32.19
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	17.65	31.46
TraesCS4A01G175700.1	Wheat	cytosol	29.63	31.45
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	18.63	31.2
TraesCS2A01G416600.1	Wheat	plastid	31.26	31.06
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.83	31.0
AT3G07040.1	Thale cress	cytosol	31.05	30.78
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.72	30.75
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	30.61	30.64
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	30.5	30.57
TraesCS7A01G044900.1	Wheat	cytosol	29.09	30.48
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	30.39	30.43
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	30.17	30.24
TraesCS7A01G044200.1	Wheat	cytosol	28.21	30.19
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	30.07	30.1
TraesCS2A01G503900.1	Wheat	plasma membrane	30.07	30.1
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.28	29.86
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	27.89	29.77
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	29.52	29.55
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	29.52	29.55
TraesCS3A01G447600.1	Wheat	cytosol	29.19	29.55
TraesCS7A01G045900.1	Wheat	cytosol	29.41	29.48
TraesCS4A01G224000.1	Wheat	cytosol	29.3	29.46
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	29.3	29.4
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	13.07	29.34
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	29.09	29.18
PGSC0003DMT400047578	Potato	plasma membrane	29.96	29.13
TraesCS4A01G444800.1	Wheat	mitochondrion	11.98	29.1
TraesCS7A01G045800.1	Wheat	extracellular	26.58	29.01
TraesCS4A01G224100.1	Wheat	cytosol	28.76	28.95
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	29.52	28.65
TraesCS7A01G423400.1	Wheat	extracellular	29.19	28.51
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	29.09	28.43
TraesCS7A01G046400.1	Wheat	cytosol	9.26	28.43
KRG98601	Soybean	cytosol	11.66	28.31
TraesCS3A01G321200.1	Wheat	cytosol	27.12	28.3
TraesCS7A01G045000.1	Wheat	cytosol	10.02	28.05
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	24.29	27.98
TraesCS2A01G093000.1	Wheat	cytosol	25.82	27.92
TraesCS7A01G046200.1	Wheat	cytosol	12.31	27.36
TraesCS4A01G444700.1	Wheat	cytosol	11.33	27.3
TraesCS4A01G224500.1	Wheat	cytosol	10.24	27.25
TraesCS2A01G480100.1	Wheat	cytosol	16.34	26.36
TraesCS4A01G393800.1	Wheat	cytosol	12.85	26.16

Protein Annotations

EnsemblPlants:TraesCS1A01G018400.2	EnsemblPlantsGene:TraesCS1A01G018400	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1A:+:9543571..9546340

Molecular Weight (calculated)

103534.0 Da

IEP (calculated)

6.962

GRAVY (calculated)

-0.077

Length

918 amino acids

Sequence
(BLAST)

001: MAEAVVAQLV VTLGGALAKE AATYGAALLC KEAAALRGLF SKIRQSKVEL ESMQAYLQEA ERFKDIDKTT AIFVGEIRGL AFRIEDVVDE FTYKLEDCKH
101: GGFAGKMKKR LKHIKTWRHL AAKLQEIEGQ LQDANRRKRD YAVTGISASF ARSTNLGQAL HFTRDEDLVG IEEHKERLIR WLTGGGDAQE QSFSKVTLVW
201: GMPGIGKTTL VDHVYNTVKV DFDAAAWVTV SESYSFEDLL KKIAGQFGIV VDVANIEMRV LAKSIHNYLQ GKRYILVLDD VWAERLWSEI RNVFPTSNCT
301: GRFVITSRKQ AVLTTREFSY AIHLEPLQEH HSWLLFCKGA FGDADDKECP LDLQELARKF IAKCQGLPIA ITCIGRLLSR KLPTSAEWED VYTGLDSQLA
401: KDVIPDAHLI LKVSLEDLPY DLKNCFLHCA LSPEDYILKR RKTMRQWITA WFITGKEESK TLEEVAEGYL AELVNRSLLQ VVQRNFAGRL KQCRMHDVIR
501: LLALNKAKEE CFGTVYNGSS AFCLVGARRI SILGGNIEQL SLSGATQLRA LHVFENYINV DFLKPILTTS NLLCILELQG TGIKMLPNEV FDLFNLRYLG
601: LRDTEIESLP EALGRLQNLE ILDAYDSNLT YLPKSVVKLQ KLRYLYACTL DAFGVARVKV PSGMQHLAGL RPLHSIKATP EFLREVAALT ELRTFGVCNV
701: RSEHSADLTN AITRMSHLVH LEIVAAAENE VLQLEGLYLP PTISGLALVG KLGKTMMPQL FSSWSHLNSL TRLQLVFSNI DEETFSCLHV LHGLRSLMLR
801: KAYEGKRLEF YARSFPELRH LEIWGAAQLN QVGIEEGAMQ NLVELWFGDC PDLRFLPDGI EHLAALEKLG LKDTSEELIE KLRQERDSDE CSDDLMKISH
901: IRNVTVALMQ KGLVERIR

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.