Factsheet for TraesCS1D01G017600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G018400.2	Wheat	cytosol	84.4	84.86
TraesCS1B01G022200.1	Wheat	cytosol	58.61	82.09
HORVU1Hr1G001490.2	Barley	endoplasmic reticulum	82.12	82.03
HORVU1Hr1G001630.1	Barley	endoplasmic reticulum	80.72	80.72
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	27.84	79.57
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	78.76	78.34
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.01	77.84
TraesCS1D01G016400.1	Wheat	cytosol	34.89	75.76
TraesCS1D01G014700.1	Wheat	peroxisome	38.57	72.95
EES08155	Sorghum	cytosol	56.55	57.24
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.1	56.48
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.99	56.38
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	53.74	53.91
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.52	53.35
TraesCS3D01G001700.1	Wheat	cytosol	53.74	53.22
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.82	52.71
TraesCS3D01G001100.1	Wheat	cytosol	39.44	52.0
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	46.05	46.1
TraesCS1D01G018800.1	Wheat	cytosol	22.75	33.23
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.85	32.06
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	31.53	31.73
TraesCS7D01G140100.1	Wheat	cytosol	31.42	31.62
TraesCS1D01G064200.1	Wheat	plastid	26.22	31.39
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	30.23	31.35
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	19.28	31.34
TraesCS1D01G017400.1	Wheat	cytosol	17.23	31.12
TraesCS7D01G416200.1	Wheat	extracellular	29.69	30.96
TraesCS7D01G436600.1	Wheat	cytosol	30.55	30.75
TraesCS2D01G413600.1	Wheat	plastid	25.35	30.71
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	30.34	30.57
TraesCS7D01G040500.1	Wheat	cytosol	27.52	30.49
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	30.23	30.46
TraesCS5D01G422100.1	Wheat	cytosol	21.78	30.45
AT3G07040.1	Thale cress	cytosol	30.34	30.24
TraesCS3D01G440300.1	Wheat	cytosol	29.69	30.21
TraesCS3D01G440400.1	Wheat	cytosol	29.69	30.14
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	20.59	30.11
TraesCS2D01G504500.1	Wheat	cytosol	29.9	30.1
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	25.68	29.92
TraesCS2D01G064200.1	Wheat	cytosol	29.9	29.9
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.12	29.86
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	29.04	29.78
TraesCS4D01G088900.1	Wheat	cytosol	29.14	29.5
TraesCS7D01G040700.1	Wheat	cytosol	29.25	29.48
TraesCS7D01G041000.1	Wheat	plastid	11.05	29.39
PGSC0003DMT400047578	Potato	plasma membrane	29.79	29.13
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	28.82	29.1
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	11.16	29.01
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	29.47	28.97
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	22.43	28.95
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	28.17	28.67
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	19.07	28.53
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	12.68	28.4
TraesCS3D01G310100.1	Wheat	cytosol	26.98	28.3
TraesCS7D01G040100.1	Wheat	cytosol	11.59	27.94
TraesCS1D01G454100.1	Wheat	cytosol	28.17	27.78
KRG98601	Soybean	cytosol	11.27	27.51
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	17.77	27.38
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.4	24.68

Protein Annotations

EnsemblPlants:TraesCS1D01G017600.1	EnsemblPlantsGene:TraesCS1D01G017600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:+:7868623..7871394

Molecular Weight (calculated)

103584.0 Da

IEP (calculated)

7.621

GRAVY (calculated)

-0.195

Length

923 amino acids

Sequence
(BLAST)

001: MAEAVVGQLV VTLGGALAKE AATYGGALLC KEAAALRGLF AKIRQSKAEL ESMQAYLQEA ERFKDTDKTT AIFVGEVRGL AFQIEDVVDE FTYKLEDCKH
101: GGFGGKMKKR LKHIKTWRRL AAKLQEIEAQ LQDANRRKRD YAVTGRSASA ARSTNQGQAL HFTRDEDLVG IEENKERLIR WLTGGSGGGD GPELSSNKVT
201: MVWGMPGVGK TTLVDHVYNT VKEDFDAAAW VTVSESYRTE DVLKKIAAQF GITVDVANTE MRGVARSIQN CLQGKRYILV LDDVWAERLW LEIRDVFPTS
301: NSTGRVVMTS RKQTVLATRE SAYEIHLKPL QAHHSWLLFC KGAFEDADDK EGPLELQKLA WKFIAKCQGL PIAITCIGRL LSRKLPTSAE WEDVYRGLDS
401: QLVKDVIPDA HLILKVSLED LPFDLKNCFL HCALSPEDYI LKRRKTMRQW ITAGFITEKD ESKTLEEVAE GYLAELVNRS LLQVVERNFA GRLKQCRMHD
501: VIRLLALNKA KEECFGNVYN GSGGTGVFSI EGARRISVLG GNIEQLSLSG ATQLRALHVF ESYIDIDLLK PILTSSSLLS TLDLQGTHIK MLPNEVFDLF
601: NLRYLGLRDT KIESMPAAVG RLQNLQVLDA YDSKLTYLPN SVVKLQKLRY LYAGTSKDSI RGVKVPKGMQ HLAGLHALQS VRATPEFLHE AAALTELRTF
701: DVCNVQSEHS AYLSNAITKM SHLVHLEIDA AAENEVLRLE GLHLPQTLSW LSLRGQLEKT SMPQLFSSLS HLNSLTRLQL EFSNIDEEAF SCLHVLHGLR
801: SLLLRKAFEG KRLEFYTGSF PKLRRLGIWG AAQLSQVRIE KGAMQDLVEL WFGDCPDLRF LPDGIEHLAG LEKLVLIDTS EELIEKLRQE RDSDELKEDI
901: VKIRHIRNVT VALTQKGLVE RIR

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.