Factsheet for TraesCS7D01G041000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G040100.1	Wheat	cytosol	71.47	64.75
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	57.35	56.06
TraesCS1D01G018800.1	Wheat	cytosol	53.6	29.43
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	74.35	28.99
TraesCS7D01G040500.1	Wheat	cytosol	67.72	28.21
TraesCS7D01G040700.1	Wheat	cytosol	73.78	27.95
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	73.78	27.92
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	73.49	27.81
TraesCS7D01G140100.1	Wheat	cytosol	73.2	27.7
TraesCS7D01G436600.1	Wheat	cytosol	72.91	27.59
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	72.05	27.29
TraesCS2D01G504500.1	Wheat	cytosol	71.76	27.15
TraesCS5D01G422100.1	Wheat	cytosol	45.24	23.79
TraesCS1D01G016400.1	Wheat	cytosol	28.82	23.53
TraesCS1D01G017400.1	Wheat	cytosol	33.43	22.7
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	58.21	22.03
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	47.55	20.83
TraesCS2D01G064200.1	Wheat	cytosol	53.6	20.15
TraesCS1D01G014700.1	Wheat	peroxisome	27.09	19.26
TraesCS3D01G001100.1	Wheat	cytosol	29.68	14.71
TraesCS7D01G416200.1	Wheat	extracellular	36.02	14.12
TraesCS3D01G440300.1	Wheat	cytosol	36.6	14.0
TraesCS3D01G440400.1	Wheat	cytosol	36.6	13.97
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	36.31	13.89
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	35.45	13.67
TraesCS4D01G088900.1	Wheat	cytosol	34.29	13.05
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	33.43	12.66
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	33.14	12.58
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	33.72	12.46
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	31.99	12.04
TraesCS1D01G454100.1	Wheat	cytosol	31.99	11.86
TraesCS3D01G310100.1	Wheat	cytosol	29.39	11.59
AT3G07040.1	Thale cress	cytosol	29.68	11.12
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	29.39	11.09
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.68	11.06
TraesCS3D01G001700.1	Wheat	cytosol	29.68	11.05
TraesCS1D01G017600.1	Wheat	cytosol	29.39	11.05
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	28.82	10.78
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.53	10.7
PGSC0003DMT400047578	Potato	plasma membrane	28.24	10.38
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	19.88	9.65
TraesCS2D01G413600.1	Wheat	plastid	20.17	9.19
TraesCS1D01G064200.1	Wheat	plastid	19.88	8.95
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	9.51	5.23
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	5.19	2.92
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	2.59	2.31
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	1.15	0.7
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	0.58	0.33
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	0.0	0.0
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G041000.1	EnsemblPlantsGene:TraesCS7D01G041000	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43886
PANTHER:PTHR43886:SF5	SEG:seg	SUPFAM:SSF52058	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:+:20549260..20550303

Molecular Weight (calculated)

39464.3 Da

IEP (calculated)

7.433

GRAVY (calculated)

-0.072

Length

347 amino acids

Sequence
(BLAST)

001: MPLSTITQLC TGSRYMTVLV LSGLPIEKIP DAIGDLFNLR HLGLRYTKVK KLPKSVEKLS NLLTLDLYEC DIHELPRGIV KLKKLKHLLA EKITDPDWRE
101: FHCRGGMRIT NGFGNLKNLQ TLQALEANGE SVKYLGELRQ LRSLRLWNVK GIYCARIIES IVQMRYLSTL SVNASDENEV LLLNVCLPNL QKLFLRGRLA
201: EGALDESPLF QAAEGQTLYE LALFSSELRE DPLPSLSRLS NLTRLEFTRA YNGEQLTFLT GWFPKLKVLQ LVDLPNLNRA EIQQGAMASL ERLELFKLSS
301: MTEVPTGIEF LLPLQYLGFH EITSDFLTLL CQCSEIQGSQ WQHSIRD

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.