Factsheet for TraesCS3D01G001700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G001510.1	Barley	extracellular, plasma membrane	80.79	82.75
HORVU3Hr1G001570.1	Barley	plasma membrane	80.69	82.64
TraesCS3D01G001100.1	Wheat	cytosol	59.87	79.71
Os01t0547000-01	Rice	plasma membrane	65.34	67.29
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.14	60.99
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	58.26	59.02
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.43	53.84
TraesCS1D01G017600.1	Wheat	cytosol	53.22	53.74
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	53.0	53.23
TraesCS1D01G014700.1	Wheat	peroxisome	26.61	50.82
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	49.36	49.89
TraesCS1D01G016400.1	Wheat	cytosol	22.42	49.18
TraesCS1D01G064200.1	Wheat	plastid	28.22	34.11
TraesCS1D01G018800.1	Wheat	cytosol	22.96	33.86
TraesCS7D01G140100.1	Wheat	cytosol	32.62	33.15
TraesCS2D01G413600.1	Wheat	plastid	26.93	32.94
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	20.06	32.92
TraesCS7D01G040500.1	Wheat	cytosol	29.4	32.89
TraesCS2D01G064200.1	Wheat	cytosol	32.51	32.83
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	31.76	32.28
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	14.06	31.8
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.22	31.73
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	31.12	31.66
TraesCS7D01G040700.1	Wheat	cytosol	31.12	31.66
TraesCS7D01G416200.1	Wheat	extracellular	29.94	31.53
TraesCS2D01G504500.1	Wheat	cytosol	31.01	31.52
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	30.04	31.46
TraesCS7D01G436600.1	Wheat	cytosol	30.58	31.08
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	20.92	30.9
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	30.04	30.87
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	26.07	30.68
AT3G07040.1	Thale cress	cytosol	30.36	30.56
TraesCS1D01G017400.1	Wheat	cytosol	16.63	30.33
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	29.18	30.22
TraesCS3D01G440300.1	Wheat	cytosol	29.4	30.21
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.15	30.18
TraesCS5D01G422100.1	Wheat	cytosol	21.24	30.0
TraesCS3D01G440400.1	Wheat	cytosol	29.18	29.92
TraesCS4D01G088900.1	Wheat	cytosol	29.18	29.82
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	29.18	29.69
TraesCS7D01G041000.1	Wheat	plastid	11.05	29.68
PGSC0003DMT400047578	Potato	plasma membrane	30.04	29.66
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	28.97	29.54
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	18.88	29.38
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	11.16	29.3
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	29.4	29.18
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	22.32	29.09
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	19.1	28.85
TraesCS3D01G310100.1	Wheat	cytosol	27.04	28.64
TraesCS1D01G454100.1	Wheat	cytosol	28.33	28.21
TraesCS7D01G040100.1	Wheat	cytosol	11.48	27.94
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.41	24.94

Protein Annotations

EnsemblPlants:TraesCS3D01G001700.1	EnsemblPlantsGene:TraesCS3D01G001700	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF28	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:843836..846634

Molecular Weight (calculated)

105248.0 Da

IEP (calculated)

6.672

GRAVY (calculated)

-0.139

Length

932 amino acids

Sequence
(BLAST)

001: MHTPDPFVVP REFSDENTDQ STMAEGVVAL LIAKLGFALA KEAATFGASL LCKEASALKG LFGEIREAKE ELESMQAYLQ GAERFKDTDE TTGIYVNKVR
101: GFSFEIEDVV DEFTYKLEDT HGGFAAKMKK RVKHIKAWRR LTIKLQDIKG RLQSADRRKV RYDMKGVEGE GLKSGHSESA GHSLNLAREE DLVGIKENKD
201: KLMHWLVGDL EEQGSKSATV WGMGGVGKTT LVDHVYKAVK MDFAKCAWIT VSSSYHVEDL LKQIASQLGI PIANANENRS LVEVIHNHLK GSNYLVILDD
301: VWNVDVWFKI RNAFPTESTG RFVITTRMQE VALLATKTCT IKLEPLERDY AWQLFCNEAF WNNENKTCPE ELEDLGKMFL DKCGGLPIAI ACVGRLLSCR
401: DPTYYQWESV YKELESQLSN NVILDVNIVL KVSLENLPTH LKNCFLHCTI FPEDYLFGRK QVIRHWIAAG FIKETGSKTL EEVAEGYLNE LVNRSLLQVA
501: ARNLRGRVRR FRMHDIIRVL ALAKSEEESF CQAYNGSRDF SAKNTRRLSM QGTNMEQLTP LLCAPSLRSL HVFQSHMRID FLEAFLKPLS LLSTLDLQGV
601: QIKRLPKMVF NLFNLRFLGL RDTQIEYLPK EIGRLQNLEV LDAFNTMLAS VPVEIAALRK LKYLYVVTIP AGDNERVLAY DGIQMPKGIG NLTDLLALQH
701: VEASSQVLSQ LGCLTNLRTF GISKVRSGHC ADLCGAITKM VNLVRVGIIA LDQREVLQLE ALCLPPTISK VDIVAQLDKR FLTQFVSSSS KLVNLTDLTL
801: CWSKLYEDSF GCLLGLHGLV TLHLCKAYDG KGLHFHATSL PKLKLLGIWD APHLSRVTIE QGAMQNIDEL LLRDCPELKD LPDGIEHLRT LDYLKLEDIS
901: EELTGKLQQN EESKECDEDW MKISHVRWVD VL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.