Factsheet for Os01t0547000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G001510.1	Barley	extracellular, plasma membrane	67.18	66.81
HORVU3Hr1G001570.1	Barley	plasma membrane	66.96	66.59
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	66.41	66.04
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	65.97	65.6
TraesCS3D01G001100.1	Wheat	cytosol	50.72	65.57
TraesCS3D01G001700.1	Wheat	cytosol	67.29	65.34
Os10t0162832-01	Rice	plasma membrane	20.0	52.77
Os10t0163040-01	Rice	cytosol	51.82	50.81
Os06t0330100-00	Rice	cytosol	46.85	48.24
Os10t0162854-01	Rice	cytosol	24.86	34.72
Os07t0186500-01	Rice	cytosol	33.37	33.33
Os09t0270700-00	Rice	cytosol	24.31	33.33
Os10t0136100-02	Rice	cytosol	33.7	32.9
AT3G07040.1	Thale cress	cytosol	32.93	32.18
Os11t0226933-01	Rice	cytosol, plasma membrane	22.87	32.09
Os12t0500500-01	Rice	endoplasmic reticulum, plasma membrane	31.6	31.74
Os11t0227700-01	Rice	cytosol	22.65	31.68
Os04t0219600-01	Rice	cytosol	23.87	30.81
Os10t0358200-00	Rice	plastid	31.71	30.76
Os11t0678400-00	Rice	cytosol, mitochondrion, nucleus, peroxisome	24.42	30.69
Os11t0227100-00	Rice	plasma membrane	17.68	30.59
Os11t0227200-01	Rice	plasma membrane	30.83	30.59
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	32.38	30.52
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.38	30.5
Os08t0260800-00	Rice	cytosol	15.8	30.43
PGSC0003DMT400047578	Potato	plasma membrane	31.71	30.4
Os11t0229500-01	Rice	plasma membrane	30.06	30.19
Os12t0246700-01	Rice	endoplasmic reticulum	31.27	30.17
Os11t0229400-01	Rice	plasma membrane	30.17	30.17
Os08t0261000-01	Rice	plastid	24.97	29.01
Os11t0229300-00	Rice	cytosol	20.66	28.73
Os08t0424700-00	Rice	cytosol	28.62	28.56
Os02t0191000-00	Rice	endoplasmic reticulum	28.51	28.26
Os08t0193700-00	Rice	plastid	29.39	27.8
Os11t0224900-00	Rice	plasma membrane	31.16	27.62
Os11t0227800-01	Rice	cytosol, plasma membrane	27.29	27.05
Os04t0219550-00	Rice	cytosol	2.21	26.67
Os04t0118800-00	Rice	cytosol	28.62	26.56
Os09t0267800-01	Rice	cytosol	11.82	25.91
Os11t0639600-01	Rice	cytosol	26.3	25.45
Os01t0521600-00	Rice	cytosol	3.87	25.36
Os11t0229700-00	Rice	cytosol, plasma membrane	7.96	25.17
Os06t0698812-00	Rice	cytosol, extracellular	7.18	22.11
Os11t0228800-00	Rice	cytosol	9.61	17.13

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4326180	EMBL:AK121218	ProteinID:BAB89236.1
ProteinID:BAF05200.1	ProteinID:BAS72604.1	ncoils:Coil	ProteinID:EAZ12274.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlantsGene:Os01g0547000	EnsemblPlants:Os01t0547000-01	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF28	UniProt:Q8RYR1	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00000A7DDC	RefSeq:XP_015620908.1	RefSeq:XP_015620909.1	RefSeq:XP_015620910.1
RefSeq:XP_015620911.1	RefSeq:XP_015620913.1	SEG:seg	:	:	:

Description

Similar to LRR19. (Os01t0547000-01)

Coordinates

chr1:+:20327992..20334833

Molecular Weight (calculated)

103237.0 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.081

Length

905 amino acids

Sequence
(BLAST)

001: MAEGVVGSLI GKLGAALAKE AATYGASLLC QEVSALKRLF AQIRDVKDEL ESMEAYLHGA ERFKDIDETT GNYVKKIRGL AFEIEDAVDE FTYKLEDKHG
101: GFTAKMKKRI KHVKAWRRLA LKLQDIKQRL KNADERKIRY DLSGIEKNGH SKSPEQSFQF AREEDLVGIE INKELLMQWL VGDSEQGCKI ATVWGMGGVG
201: KTTLVSQVYK TVKLDFDVSG FVTVTNSYQF DDLLKKISTE FEIPIDADNI AVGSLVESIH HHLQGKRYIL VLDDVWQPDV WFKLRNAFPT ESTGRFIFTT
301: RMQEVALLAT KKCTIELAPL DAHCSWQLFC KEAFWNADNK TCPEELQDIA SMFVDKCAGL PIAIACIGRL LSCKHPIYSE WEHVYKDLEL QLTNNVILDV
401: DIVLKVSLED LQRNLKNCFL HCTIFPESYA FNRKRLIRHW IAAGYIQEVG SKTVEEVAEG YLNELVNRSL LQVVERNLSG RVRRCRMHDI IRLLALRKSK
501: EEFFCQVYKG SEACSIENTR RLSIQNVSIQ HLSGSSAPCL RSLHVFSIYR RIDSLEAFLK SFKFLSTLDL QGISIKRLPK IVFDLFNLRF LGLRKTYIEY
601: LPKELSRLQN LEVLDAYDSK LLILPVEVAT LWKLKYLYVV RVPEGSYDRV LAFDGLQVPM GICNLIDLLA LQLIEASTEV LRHIGCLTKL RTFAIGKVRN
701: EHCADLCDAI MRMTCLVHIT IISADEKEVL QLETLCLPST IAKIDLGGRL SKESMSQLIS TSSNLVNLTE LNLCFSKLNE DSFACILNLH NLVELYLSKA
801: YDGKELIFHA TSFPKLKLLA VWDAPYLRKV AIQQGALQSL VRLWLADCPE LRDVPDGIEH LRTLEHLRIK GSSDELWRKL EIKGKSNKRN EDRMKISHVK
901: WVEIV

Best Arabidopsis Sequence Match ( AT5G35450.2 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.