Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0521600-00 | Rice | cytosol | 12.54 | 84.78 |
| Os11t0678400-00 | Rice | cytosol, mitochondrion, nucleus, peroxisome | 53.91 | 69.86 |
| Os08t0260800-00 | Rice | cytosol | 32.15 | 63.83 |
| TraesCS4A01G175700.1 | Wheat | cytosol | 58.84 | 63.47 |
| TraesCS1B01G023100.1 | Wheat | endoplasmic reticulum | 61.2 | 62.75 |
| TraesCS1D01G018800.1 | Wheat | cytosol | 41.26 | 60.92 |
| HORVU1Hr1G002640.1 | Barley | plasma membrane | 57.88 | 57.75 |
| Os10t0136100-02 | Rice | cytosol | 55.84 | 56.2 |
| HORVU1Hr1G002730.1 | Barley | cytosol | 32.69 | 54.95 |
| TraesCS1D01G018700.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 20.47 | 53.8 |
| Os11t0227700-01 | Rice | cytosol | 27.76 | 40.03 |
| Os11t0226933-01 | Rice | cytosol, plasma membrane | 27.65 | 40.0 |
| Os08t0261000-01 | Rice | plastid | 31.83 | 38.13 |
| Os09t0270700-00 | Rice | cytosol | 26.69 | 37.73 |
| Os04t0219600-01 | Rice | cytosol | 27.97 | 37.23 |
| Os07t0186500-01 | Rice | cytosol | 36.12 | 37.2 |
| Os11t0229300-00 | Rice | cytosol | 25.94 | 37.17 |
| Os11t0227100-00 | Rice | plasma membrane | 20.79 | 37.09 |
| Os09t0479500-01 | Rice | endoplasmic reticulum, golgi | 38.05 | 36.98 |
| Os11t0229400-01 | Rice | plasma membrane | 35.37 | 36.46 |
| Os11t0229700-00 | Rice | cytosol, plasma membrane | 11.15 | 36.36 |
| Os02t0191000-00 | Rice | endoplasmic reticulum | 35.48 | 36.25 |
| Os11t0227200-01 | Rice | plasma membrane | 35.26 | 36.07 |
| Os11t0229500-01 | Rice | plasma membrane | 34.73 | 35.96 |
| Os11t0227800-01 | Rice | cytosol, plasma membrane | 35.16 | 35.93 |
| Os12t0500500-01 | Rice | endoplasmic reticulum, plasma membrane | 32.9 | 34.07 |
| Os12t0246700-01 | Rice | endoplasmic reticulum | 33.55 | 33.37 |
| Os11t0224900-00 | Rice | plasma membrane | 36.01 | 32.91 |
| Os10t0162854-01 | Rice | cytosol | 22.72 | 32.72 |
| Os10t0163040-01 | Rice | cytosol | 32.26 | 32.61 |
| Os04t0219550-00 | Rice | cytosol | 2.57 | 32.0 |
| Os01t0547000-01 | Rice | plasma membrane | 30.76 | 31.71 |
| Os06t0330100-00 | Rice | cytosol | 29.26 | 31.06 |
| Os09t0267800-01 | Rice | cytosol | 13.72 | 30.99 |
| AT3G07040.1 | Thale cress | cytosol | 30.44 | 30.67 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 30.01 | 30.08 |
| Os11t0639600-01 | Rice | cytosol | 30.12 | 30.05 |
| Os04t0118800-00 | Rice | cytosol | 31.19 | 29.85 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 29.26 | 28.92 |
| Os08t0424700-00 | Rice | cytosol | 27.97 | 28.78 |
| Os06t0698812-00 | Rice | cytosol, extracellular | 9.0 | 28.57 |
| Os08t0193700-00 | Rice | plastid | 28.94 | 28.21 |
| Os10t0162832-01 | Rice | plasma membrane | 9.75 | 26.53 |
| Os11t0228800-00 | Rice | cytosol | 12.86 | 23.62 |
Protein Annotations
| EntrezGene:107277604 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:AAL58132.1 | ProteinID:AAP53272.1 |
| ProteinID:BAT10484.1 | ProteinID:EAZ15793.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | EnsemblPlantsGene:Os10g0358200 | EnsemblPlants:Os10t0358200-00 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF5 | UniProt:Q8W2U9 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI00000AA14C | RefSeq:XP_015613479.1 | RefSeq:XP_015613480.1 | SEG:seg | : | : |
Description
Similar to NB-ARC domain containing protein. (Os10t0358200-00)
Coordinates
chr10:+:10956338..10959148
Molecular Weight (calculated)
107350.0 Da
IEP (calculated)
7.425
GRAVY (calculated)
-0.250
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAVILLAV KKIGVALGNE AINQATSYFK KFVTQLTELQ GSMGRIKREL RLMHEFLSRM DVRNRNNQTY EIWVEEVRML VHRIEDIVDD YLHLVGHKQD
101: TGWGTYLKKG FKRPNVLFSL NRIASSIKDA EANLVHLFQA KERWVWMAGG RATGSKSSSY IIETSRHLAN ISRSLDEDLV GVDENIRKLH EWLTSDELQR
201: EVIALHGMGG LGKTALAANV YRNEREKFEC HAWVSISQTY SIKDVLKCLV TELDLKKKIQ GNIGDMDTAT LQNELKKFLM DQKYLIVLDD VWVPETVNDL
301: FSIFVSNLKG SRVLVTTRID GVAHLAFPDK RITLEPLSEK KSWELFCKTA FPRDKNHECP TKLTVLAQQI VSKCEGLPLA IVSVGRLLFV RDKTEEEFRR
401: IQNQLDWELI NNPSLEHVRN ILYLSYIYLP THLKSCFLYC SMFPEDYLIT RKKLIRWWVA EGFIEERGGN TMEEVAEEYL KELVHRNMLQ LIEMNGFGRI
501: KSFRMHDIVR ELAIDLCRKE HFGCSYNCEN KHGKFLEGKD ERRVVIHKLD KHINQAILNE CHSLRCLITL DEATPPSPCL LHLVADKCRY MSVLELTGLP
601: IEKVPDAIGD LFNLRHLGLR GSKVKHLPNS IEKLSNLLTL DLNETEIQEV PNGIVKLKKL RHLFVEKMNE LYGREFRPRT GVRIHKGLEK LNELQTLQGL
701: EVQDEVSLRR LGELRQMRSI RIWGVKESYC ESLCESLQQM EFLSFLSVNA SGKEEVLKLD GLNPLPPNLR KLNLRGILAE AGMLLGSPAA GDQNNHSLYS
801: VHLSWSQLIE DPLPSLSRWS SLTDLMLTRA YVGEQFVFHQ GWFPNLKELV LRDMPDLKRL EIHDGAMTSL QDLTLVNLSG LTEVPSGIEL LSTLKNLGFW
901: EITQDFLAAL RQCHRIHHMQ WWYSVRGETD GAL
101: TGWGTYLKKG FKRPNVLFSL NRIASSIKDA EANLVHLFQA KERWVWMAGG RATGSKSSSY IIETSRHLAN ISRSLDEDLV GVDENIRKLH EWLTSDELQR
201: EVIALHGMGG LGKTALAANV YRNEREKFEC HAWVSISQTY SIKDVLKCLV TELDLKKKIQ GNIGDMDTAT LQNELKKFLM DQKYLIVLDD VWVPETVNDL
301: FSIFVSNLKG SRVLVTTRID GVAHLAFPDK RITLEPLSEK KSWELFCKTA FPRDKNHECP TKLTVLAQQI VSKCEGLPLA IVSVGRLLFV RDKTEEEFRR
401: IQNQLDWELI NNPSLEHVRN ILYLSYIYLP THLKSCFLYC SMFPEDYLIT RKKLIRWWVA EGFIEERGGN TMEEVAEEYL KELVHRNMLQ LIEMNGFGRI
501: KSFRMHDIVR ELAIDLCRKE HFGCSYNCEN KHGKFLEGKD ERRVVIHKLD KHINQAILNE CHSLRCLITL DEATPPSPCL LHLVADKCRY MSVLELTGLP
601: IEKVPDAIGD LFNLRHLGLR GSKVKHLPNS IEKLSNLLTL DLNETEIQEV PNGIVKLKKL RHLFVEKMNE LYGREFRPRT GVRIHKGLEK LNELQTLQGL
701: EVQDEVSLRR LGELRQMRSI RIWGVKESYC ESLCESLQQM EFLSFLSVNA SGKEEVLKLD GLNPLPPNLR KLNLRGILAE AGMLLGSPAA GDQNNHSLYS
801: VHLSWSQLIE DPLPSLSRWS SLTDLMLTRA YVGEQFVFHQ GWFPNLKELV LRDMPDLKRL EIHDGAMTSL QDLTLVNLSG LTEVPSGIEL LSTLKNLGFW
901: EITQDFLAAL RQCHRIHHMQ WWYSVRGETD GAL
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.