Factsheet for Os08t0424700-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P25780_001	Banana	cytosol	45.65	45.25
VIT_05s0020g04930.t01	Wine grape	cytosol	23.37	39.48
PGSC0003DMT400016161	Potato	cytosol	25.69	37.28
KRH74292	Soybean	cytosol	38.04	36.94
KRH39629	Soybean	cytosol	37.93	36.71
VIT_01s0011g00990.t01	Wine grape	cytosol	31.64	36.15
VIT_01s0011g00970.t01	Wine grape	cytosol	33.85	35.78
VIT_01s0011g00960.t01	Wine grape	nucleus	33.96	35.36
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	34.73	35.2
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	36.05	35.12
KRH39626	Soybean	cytosol	36.16	34.6
KRH74294	Soybean	cytosol	36.05	34.57
VIT_01s0011g01020.t01	Wine grape	cytosol	34.29	34.52
PGSC0003DMT400065023	Potato	cytosol, endoplasmic reticulum	35.61	34.04
Solyc01g086810.2.1	Tomato	nucleus	35.17	33.23
Os11t0227100-00	Rice	plasma membrane	19.07	33.08
Os11t0226933-01	Rice	cytosol, plasma membrane	23.26	32.71
Os09t0270700-00	Rice	cytosol	22.6	31.06
Os11t0227700-01	Rice	cytosol	21.83	30.6
Os11t0229700-00	Rice	cytosol, plasma membrane	9.59	30.42
Os11t0678400-00	Rice	cytosol, mitochondrion, nucleus, peroxisome	23.59	29.72
Os07t0186500-01	Rice	cytosol	29.55	29.58
Os11t0229400-01	Rice	plasma membrane	29.22	29.28
Os11t0227800-01	Rice	cytosol, plasma membrane	29.33	29.13
Solyc11g010160.1.1	Tomato	cytosol	29.0	29.0
Os11t0229500-01	Rice	plasma membrane	28.67	28.86
Os04t0219600-01	Rice	cytosol	22.27	28.82
PGSC0003DMT400094852	Potato	cytosol	28.78	28.81
Os01t0547000-01	Rice	plasma membrane	28.56	28.62
Os11t0229300-00	Rice	cytosol	20.51	28.57
Os09t0267800-01	Rice	cytosol	12.9	28.33
Os06t0330100-00	Rice	cytosol	27.45	28.33
Os10t0163040-01	Rice	cytosol	28.78	28.28
Os10t0358200-00	Rice	plastid	28.78	27.97
Os12t0500500-01	Rice	endoplasmic reticulum, plasma membrane	27.78	27.97
Os11t0227200-01	Rice	plasma membrane	28.11	27.96
Os10t0162854-01	Rice	cytosol	19.96	27.93
Os10t0136100-02	Rice	cytosol	28.22	27.62
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	28.78	27.19
Os02t0191000-00	Rice	endoplasmic reticulum	27.12	26.94
Os08t0261000-01	Rice	plastid	22.82	26.57
Os08t0193700-00	Rice	plastid	27.56	26.12
Os11t0639600-01	Rice	cytosol	26.68	25.88
Os12t0246700-01	Rice	endoplasmic reticulum	26.02	25.16
Os10t0162832-01	Rice	plasma membrane	9.37	24.78
Os11t0224900-00	Rice	plasma membrane	27.89	24.78
Os08t0260800-00	Rice	cytosol	12.46	24.04
Os04t0118800-00	Rice	cytosol	25.25	23.49
Os11t0228800-00	Rice	cytosol	12.46	22.24
Os04t0219550-00	Rice	cytosol	1.76	21.33
Os06t0698812-00	Rice	cytosol, extracellular	6.73	20.75
VIT_01s0011g01000.t01	Wine grape	nucleus	34.84	20.05
Os01t0521600-00	Rice	cytosol	1.76	11.59

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:ABX71479.1	ProteinID:BAC55740.1
ProteinID:BAC99807.1	ProteinID:BAF23748.1	ProteinID:BAT05492.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0007265
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0019888
GO:GO:0019903	GO:GO:0030234	GO:GO:0043531	GO:GO:0043666	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlantsGene:Os08g0424700	EnsemblPlants:Os08t0424700-00	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF19	UniProt:Q84Q56	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00000045DC
SEG:seg	:	:	:	:	:

Description

NB-ARC domain containing protein. (Os08t0424700-00)

Coordinates

chr8:+:20389564..20392287

Molecular Weight (calculated)

103679.0 Da

IEP (calculated)

8.528

GRAVY (calculated)

-0.180

Length

907 amino acids

Sequence
(BLAST)

001: MAAPAVPSPQ KKLIEVLQRE QDILWRILWE NIDKVKELTD STSATLRGPE IESMPKTAKI WLHQVREINR DIEDILEKSP SKTCSSKGSN ILSCITQPIN
101: FVARQRIYKQ VQSLSARIDT IKLRLSLLTN FDDKEAPANP TRYQLDDRQL DMLSLDEAKV IGIGYPKAKV TQLLLDEEKQ LRVISIIGSA GVGKTTLARS
201: VYNDKKVQGR FRCHAWITIG APIPMVDRLK SIMVQIFVEK LEEIPARLDF MDEIQIAEVI GRYLADKSFL VVLDDIWNSD TWDYLKLALP NNGQGSRIIV
301: STRAQEIGRD CRLASDIQIF EKRPLNEDDA WLLFCNKAFP AIQARCPAEL EETGRKIVRE CHGVPLLVVT IGGLMSMKEQ TVQVWKNVLD NLHKKYLPEF
401: TLPSILWFAY SDLPHHLKCC LLYFIMFPRK YSIKRMTLIR LWMAEGFIKN DQESTLEDTA GRYLTELIDR GMVQVADFYD YGRVKSCSVH DMLREIIILK
501: STEDNFGIPV TRGVNKVRGN VRRLSIINTN DDFLEDNSCT NLRTLFVFGA SSISTTSLHA FLVGFRLLRI LDLEGAPVES LPDELPDLFY LRYLSLRNTR
601: IDKLPKSLKK MMNLQTLDLK GTYVSQLPSG ITKLESLRHL LAYRYYSGRH PPYYYTLGVT LPRGIGNLKE LQKLTYVEAN QGNGTIEELG SLTQLRRLGI
701: VKLRERDCMH LCSSVAKMTE LLSLSASSLD DEILDLGSLN PAPQCLRRLY LRGPLPGIPS WLHSLKNLVR IRLRWSRLNE DSLKELQSLP LVELALIQAY
801: DGTKLEFTQG FARLEILELD HLTNLEHINL EKSMPGLQKI SIRSCDKLLT IPHGIEGLEN LKELYLFAMP KNFVESLMTG GVKHRRVEHI PVIRHFNEHR
901: DISLTNL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.