CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39629	Soybean	cytosol	92.93	92.64
KRH74294	Soybean	cytosol	54.39	53.7
KRH39626	Soybean	cytosol	54.28	53.48
VIT_05s0020g04930.t01	Wine grape	cytosol	29.76	51.77
PGSC0003DMT400016161	Potato	cytosol	33.19	49.6
PGSC0003DMT400065023	Potato	cytosol, endoplasmic reticulum	48.82	48.05
Solyc01g086810.2.1	Tomato	nucleus	48.39	47.08
GSMUA_Achr8P25780_001	Banana	cytosol	40.36	41.2
KRG98889	Soybean	cytosol	33.94	38.94
KRH56222	Soybean	cytosol	38.54	38.14
Os08t0424700-00	Rice	cytosol	36.94	38.04
KRG98589	Soybean	mitochondrion	7.07	37.71
KRG98600	Soybean	cytosol, peroxisome	22.91	37.61
PGSC0003DMT400094852	Potato	cytosol	36.4	37.53
KRH45994	Soybean	cytosol	37.9	37.42
KRH56223	Soybean	cytosol	37.69	37.33
Solyc11g010160.1.1	Tomato	cytosol	36.19	37.27
KRH56221	Soybean	cytosol	35.65	37.12
KRG98635	Soybean	cytosol	14.56	36.66
KRG89708	Soybean	cytosol	36.3	36.37
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.97	36.36
KRG98654	Soybean	peroxisome	35.44	36.25
KRH56303	Soybean	cytosol	29.98	36.18
KRG89705	Soybean	cytosol	35.65	35.96
KRG98610	Soybean	cytosol	23.02	35.95
KRH46198	Soybean	cytosol	33.08	35.76
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	27.41	35.65
KRG98721	Soybean	cytosol	34.69	35.53
KRH46192	Soybean	cytosol	34.26	35.44
KRG98595	Soybean	cytosol	34.9	35.43
KRG98602	Soybean	cytosol	34.9	35.43
KRG98719	Soybean	cytosol	34.15	35.33
KRG98585	Soybean	cytosol	34.69	35.26
KRH00079	Soybean	nucleus	34.05	35.26
KRG98640	Soybean	cytosol	32.76	35.25
KRH46220	Soybean	cytosol	34.05	35.22
KRG98649	Soybean	cytosol	34.15	35.21
KRG98637	Soybean	cytosol	34.58	35.07
KRG98583	Soybean	nucleus	34.48	35.04
KRH46266	Soybean	cytosol	33.94	34.99
KRG98651	Soybean	cytosol	29.66	34.71
KRG98720	Soybean	cytosol, plasma membrane	33.73	34.69
KRG98590	Soybean	cytosol	26.66	34.68
KRG98632	Soybean	cytosol	28.37	34.55
KRG98648	Soybean	cytosol	33.08	34.45
KRG98641	Soybean	cytosol	30.09	34.35
KRG98584	Soybean	cytosol	26.34	34.26
KRG98656	Soybean	cytosol	16.27	33.63
KRH46576	Soybean	cytosol	23.02	33.18
KRG98599	Soybean	cytosol	17.34	32.86
KRH76365	Soybean	cytosol	24.63	32.86
KRG98645	Soybean	cytosol	22.7	32.27
KRH62703	Soybean	cytosol	22.48	32.26
KRG98644	Soybean	endoplasmic reticulum	9.85	32.06
KRG98601	Soybean	cytosol	12.96	32.01
KRG98659	Soybean	cytosol	12.42	30.69
KRG98604	Soybean	cytosol	8.78	26.54
KRG98700	Soybean	cytosol	5.03	22.17

Protein Annotations

EntrezGene:100305458	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02000012	UniProt:C6ZS43
EMBL:FJ014886	EnsemblPlantsGene:GLYMA_01G010500	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008219	GO:GO:0009626	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EnsemblPlants:KRH74292	ProteinID:KRH74292	ProteinID:KRH74292.1	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF30	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0001B06DDC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:1018533..1021955

Molecular Weight (calculated)

106854.0 Da

IEP (calculated)

7.909

GRAVY (calculated)

-0.198

Length

934 amino acids

Sequence
(BLAST)

001: MADSSVSFLL DKLTLLLQAE VNLQRGVRED VQHIKYELER HRGILRVADA LEDKDPELKA WVKRVRDVAH DMEDAIDEFS LRLVDQHGQG NSSSFHVNFF
101: IRHRIASNIQ NIKSRVDIIS QGRPNIAGIG SGSSQRLRLD SQGDALLLEE ADLVGIDKPK RQLSDLLFNE EAGRAVIPIY GMGGLGKTTL AKQVYDDPKV
201: KKRFRIHAWI NVSQSFQLEV LLKDLVQQLH NVIGKPSPEA VGQMKSDQLK ELIKNLLQQS RYLIVLDDVW HVKVWDSVKL ALPNNNRGSR VMLTTRKKDI
301: ALYSCAELGK DFNLEFLPEE ESWYLFCKKT FQGNPCPPYL EAVCRNILKM CGGLPLAIVA IGGALATKNR ANIEEWQMVY RSFGSEIEGN DKLEDMKKVL
401: SLSFNELPYY LKSCLLYLSI FPEFHAIEHM RLIRLWIAEG FVNGEDGKTL EEVADSYLKE LLDRSLLQVV AKTSDGRMKT CRMHDLLREI VNLKSKDQNF
501: ATIAKDQDII WPDKVRRLSI INTLNNVQQN RTTFQLRSLL MFASSDSLEH FSIRALCSSG YKLLRVLDLQ DAPLEVFPAE IVSLYLLKYL SLKNTKVKSI
601: PGSIKKLQQL ETLDLKHTYV TVLPVEIVEL QRLRHLLVYR YEIESYAYLH SRHGFMVAAP IGLMQSLQKL CFIEANQALM IELGKLTQLR RLGIRKMRKQ
701: DGAALCSSIE KMINLRSLSI TAIEDDEIID IHNIFRPPQY LQQLYLGGRL DNFPQWISSL KNLVRVFLKW SRLEEDPLVH LQDLPNLRHL EFLQVYVGET
801: LHFKAKGFPS LKVLGLDDLD GLKSMTVEEG AMPGLKKLII QRCDSLKQVP LGIEHLTKLK SIEFFDMPEE LITALRPNGG EDYWRVQHVP AVYISYWRDG
901: GWDVYSLETL GERESDSSSG TAKRSLEICT LWKV

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.