CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 2
plasma membrane 2
vacuole 2
golgi 2
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56222	Soybean	cytosol	85.84	81.57
KRH56223	Soybean	cytosol	83.17	79.11
KRH56303	Soybean	cytosol	62.65	72.61
KRH62703	Soybean	cytosol	46.6	64.21
KRH45994	Soybean	cytosol	49.05	46.51
VIT_06s0009g01350.t01	Wine grape	cytosol	32.44	46.34
VIT_07s0005g06240.t01	Wine grape	cytosol	25.75	46.02
KRG89708	Soybean	cytosol	47.05	45.28
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	36.12	45.13
VIT_07s0005g06180.t01	Wine grape	cytosol	46.04	44.94
KRG89705	Soybean	cytosol	46.38	44.92
VIT_07s0005g06210.t01	Wine grape	cytosol	46.04	44.22
VIT_07s0005g06220.t01	Wine grape	cytosol	44.59	43.29
KRG98656	Soybean	cytosol	21.74	43.14
KRG98889	Soybean	cytosol	39.13	43.12
KRG98654	Soybean	peroxisome	43.59	42.83
KRG98641	Soybean	cytosol	38.8	42.54
KRH46220	Soybean	cytosol	42.81	42.52
KRG98590	Soybean	cytosol	34.0	42.48
KRG98637	Soybean	cytosol	43.48	42.35
KRG98585	Soybean	cytosol	43.37	42.33
KRG98602	Soybean	cytosol	43.37	42.28
KRH46576	Soybean	cytosol	30.43	42.13
KRG98595	Soybean	cytosol	43.14	42.07
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.26	41.99
KRG98649	Soybean	cytosol	42.36	41.94
KRH00079	Soybean	nucleus	42.14	41.91
KRG98583	Soybean	nucleus	42.92	41.89
KRG98651	Soybean	cytosol	37.24	41.85
KRG98600	Soybean	cytosol, peroxisome	26.53	41.83
KRG98610	Soybean	cytosol	27.87	41.81
KRH46198	Soybean	cytosol	40.25	41.78
KRG98719	Soybean	cytosol	42.03	41.75
KRH46192	Soybean	cytosol	42.03	41.75
KRH46266	Soybean	cytosol	42.14	41.72
KRG98584	Soybean	cytosol	33.33	41.64
KRG98648	Soybean	cytosol	41.25	41.25
KRG98721	Soybean	cytosol	41.58	40.9
KRG98632	Soybean	cytosol	34.89	40.81
KRG98599	Soybean	cytosol	22.41	40.77
KRG98589	Soybean	mitochondrion	7.92	40.57
VIT_07s0005g06200.t01	Wine grape	cytosol, plasma membrane	40.47	40.56
KRG98640	Soybean	cytosol	39.02	40.32
KRG98720	Soybean	cytosol, plasma membrane	40.69	40.2
KRG98635	Soybean	cytosol	16.61	40.16
KRG98645	Soybean	cytosol	29.32	40.03
KRG98601	Soybean	cytosol	16.72	39.68
KRH76365	Soybean	cytosol	30.21	38.71
KRG98659	Soybean	cytosol	16.16	38.36
KRG98604	Soybean	cytosol	12.71	36.89
KRG98644	Soybean	endoplasmic reticulum	11.71	36.59
KRH74292	Soybean	cytosol	37.12	35.65
KRG98700	Soybean	cytosol	8.36	35.38
KRH39629	Soybean	cytosol	36.79	35.22
KRH74294	Soybean	cytosol	36.79	34.88
KRH39626	Soybean	cytosol	36.79	34.81
VIT_06s0009g01360.t01	Wine grape	cytosol	39.8	33.12
Os04t0219600-01	Rice	cytosol	23.41	29.96
Os04t0219550-00	Rice	cytosol	2.01	24.0

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A0R0JNL9	EMBL:ACUP02004106
EnsemblPlantsGene:GLYMA_06G311000	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	EnsemblPlants:KRH56221	ProteinID:KRH56221
ProteinID:KRH56221.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF14	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0006EDA89F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:49960552..49964926

Molecular Weight (calculated)

102248.0 Da

IEP (calculated)

8.973

GRAVY (calculated)

-0.134

Length

897 amino acids

Sequence
(BLAST)

001: MAEIAVAFAL GQVFQILNDE TNLLGGIHKD FSNIRDELES IQAFLKDADR KAADEANTNH GIRTWVKQVR EASFRIEDII DEYLRVIHVV PHLGCEASIC
101: KITSLIKTSI SRHQIATKIQ DIKLSISVIK ERSERYKFQP SQEPPSSSST RMGSLFIEET EIVGFKLPRD ELVGWLLKGT EERTVISVVG MGGLGKTTLA
201: KHVFDSEKVK GHFDYRACIT VSQSYSVRGL FIEMIKQFCR EAKDPLPEML HEMDEKSLIS EARQYLQHKR IIITTRMMHV AEFFKKSFPV HILSLQLLPP
301: DKAWELFCKK AFRFELHGQC PALLEGMSNE IVRKCKGLPL AIVAIGGLLS TKSKTVFEWQ KVNQNLNLEL QRNAHLTSIT KILSLSYDDL PYYLKPCILY
401: FGIYPQDYSI NHNRLTRQWI AEGFVQSDGR RTSEQIADEY LSELIYRSLV QVSTVGFEGK VKSCQVHDIL HEMIVRKLKD LCFCHFVHGG DESATSGTTR
501: RLSVDISSNN VLKSTNYTHI RAIHVFGKGG LLELFTGLLS SKSRVLKVLD LHGTSLNYIS GNLGNLFHLR YLNLRGTKVQ VLPKSLGKLQ NLETLDIRDT
601: LVHELPSEIN MLKKLRHLLA FHRNYEARYS LLGFTTGVLM EKGIKNLTSL LKLCYVEVDH GGIDLIQEMK FLWQLSKLGL RRVRREYGNA ICASVVEMKH
701: LESLDITAIG EDEIIDLNPI SSLPQLQRLK LKTRLEKMPN WISKLEFLVE IRLGLSNLKD DLLRSVENLP NLLKLGIWDN AYGGEILHFQ SGGFPKLKEL
801: YLARLNRVNS VLIDKGSLLS LEYFIIAKIP HLKKLSSGIK ALDNLKVIDF RDMSTELVES IDPKKGQDYE IINHVPQVLI RHWIGPKLND FDIRSIH

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.