Factsheet for VIT_07s0005g06200.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g06240.t01	Wine grape	cytosol	44.8	79.88
VIT_07s0005g06180.t01	Wine grape	cytosol	68.38	66.59
VIT_07s0005g06220.t01	Wine grape	cytosol	67.82	65.69
VIT_07s0005g06210.t01	Wine grape	cytosol	65.7	62.95
VIT_06s0009g01350.t01	Wine grape	cytosol	37.88	53.98
KRH56221	Soybean	cytosol	40.56	40.47
KRG98644	Soybean	endoplasmic reticulum	12.85	40.07
KRH56223	Soybean	cytosol	41.79	39.66
KRH56222	Soybean	cytosol	41.56	39.41
KRH56303	Soybean	cytosol	33.74	39.02
VIT_06s0009g01360.t01	Wine grape	cytosol	46.59	38.68
KRG98590	Soybean	cytosol	30.95	38.58
KRG89708	Soybean	cytosol	40.0	38.41
KRH45994	Soybean	cytosol	40.34	38.16
KRG89705	Soybean	cytosol	39.44	38.12
KRG98659	Soybean	cytosol	15.98	37.83
KRG98641	Soybean	cytosol	34.08	37.29
KRG98656	Soybean	cytosol	18.77	37.17
KRG98889	Soybean	cytosol	33.74	37.1
KRG98651	Soybean	cytosol	33.07	37.09
KRG98584	Soybean	cytosol	29.72	37.05
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.1	36.9
KRG98645	Soybean	cytosol	27.04	36.83
KRG98599	Soybean	cytosol	20.22	36.71
KRG98649	Soybean	cytosol	36.98	36.53
KRG98595	Soybean	cytosol	37.54	36.52
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	37.99	36.52
KRH46198	Soybean	cytosol	35.2	36.46
KRG98648	Soybean	cytosol	36.54	36.45
KRG98585	Soybean	cytosol	37.32	36.34
KRG98583	Soybean	nucleus	37.32	36.34
VIT_05s0020g04930.t01	Wine grape	cytosol	21.79	36.31
KRG98637	Soybean	cytosol	37.32	36.26
KRG98604	Soybean	cytosol	12.51	36.25
KRH46220	Soybean	cytosol	36.54	36.21
KRH00079	Soybean	nucleus	36.42	36.14
KRG98654	Soybean	peroxisome	36.76	36.03
KRG98640	Soybean	cytosol	34.86	35.94
KRH46266	Soybean	cytosol	36.2	35.76
KRG98602	Soybean	cytosol	36.65	35.65
KRG98719	Soybean	cytosol	35.75	35.44
KRG98721	Soybean	cytosol	35.87	35.2
KRG98720	Soybean	cytosol, plasma membrane	35.64	35.13
KRG98610	Soybean	cytosol	23.46	35.12
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	28.16	35.1
KRG98632	Soybean	cytosol	30.06	35.07
VIT_01s0011g00960.t01	Wine grape	nucleus	33.85	34.79
KRH46192	Soybean	cytosol	35.08	34.77
KRH46576	Soybean	cytosol	25.14	34.72
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	34.3	34.3
KRH62703	Soybean	cytosol	24.8	34.1
VIT_01s0011g00970.t01	Wine grape	cytosol	32.4	33.8
VIT_01s0011g01020.t01	Wine grape	cytosol	33.85	33.63
VIT_01s0011g00990.t01	Wine grape	cytosol	29.72	33.5
KRH76365	Soybean	cytosol	25.92	33.14
KRG98600	Soybean	cytosol, peroxisome	20.78	32.69
VIT_00s0515g00020.t01	Wine grape	cytosol	30.28	31.96
Os04t0219600-01	Rice	cytosol	23.58	30.1
KRG98635	Soybean	cytosol	12.4	29.92
KRG98700	Soybean	cytosol	6.93	29.25
KRG98589	Soybean	mitochondrion	5.59	28.57
Os04t0219550-00	Rice	cytosol	2.01	24.0
VIT_01s0011g01000.t01	Wine grape	nucleus	35.2	19.99

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB60268	ProteinID:CCB60268.1	UniProt:F6I002
EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF14
InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210A2D2	ArrayExpress:VIT_07s0005g06200
EnsemblPlantsGene:VIT_07s0005g06200	EnsemblPlants:VIT_07s0005g06200.t01	:	:	:	:

Description

No Description!

Coordinates

chr7:-:11093802..11097518

Molecular Weight (calculated)

101277.0 Da

IEP (calculated)

9.457

GRAVY (calculated)

-0.097

Length

895 amino acids

Sequence
(BLAST)

001: MAEIAVNLVI DKLLPLLDQE ARLLGGVHTQ VEDIKTELLY IQAFLMDADA KAEKADVSQG LKTWIQDLRE TAYSIEDVID EYLLHLGNPN RRHGFIGFLY
101: KVARLIKKLI RRHEIASKIH DIQKKVHKLR EISSSNGFNK PFESGSTSSK GSAPQPDPPV TSLFIDDSEI VGIGSQKNEL ISRLVKGTLK RTVISVVGMG
201: GLGKTTLAKK VYANMRVVKH FDCHAWITVS QSFQMKELLR RMMEKFYEAR KEKVPEDINR MDNESLITQV REYLQDKRYV VVFDDVWKAG FWESITPALP
301: ENKKGSRIII TTRKDDVATC CKDDYIHRLP HLSPDSSREL FCKKAFQGRC PPELKKLSDD IVKRCGGLPL AIVAIGGLLS RKEKIVSLWK KFKDYTIKCG
401: ILTRLWIAEG FVKTKRGVTL EETAEGFLTE LIRRSLVQVS DVYIDGNIKR CHIHDLMREI ILKKAEELSF FSVMAGEASC FDGRFRRLSV QNSSNNVLDI
501: PSKKSHIRSI FLYNSEMFSL GTLASKFKFL KVLDLGGAPL ERIPEDLGNL LHLRYLSLRK TRVRMLPRSI GKLQNLQTLD LKYSLVEDLP VEINRLQKLC
601: NILCFDYAYK ADLRWDSVRG VHVKEGIGGL EDLQKLTAVD VTHGVQIITE LGKLRQLRKL GITKLSRGNG QRLCASISNM VHLKYLSVCS LSEDEILDIQ
701: YMSNPPPFLS TVYLMGRLER LPDWISKLPS LVRVILTRSN LANDPMQVFQ ALPSLQALSL FQTSVVEQLC FGATGIQKLK RLRIYDLIGL KRVKIEDGTL
801: PLLEELMIGR CPQLEELPSG IRHLKLANEI FPSKDMGIQV SSLSANKTWN WHTTLEDPIA GISNGLMAEI DGGGVCLFLL SFCLNLIISL SWLLV

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.